Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1425 ATGTATTTGTCGGAGAAGCCGCGTCCGATCGATTTCTACAAGGAGGAAGGCGCGCGCGACATGATGATCGAGGTGGTCTCCAACGGTGAACTCGCGCCTCCGCCGCCGCACCACCCGCCGCCGATGATCCTCGGCGAGAGCAGCGGAGAAGACCCCGAGGTGGAGATCAAGGCCCCCAAGAAACGGGCCGAGACGTGGGTACAGGACGAGACGCGCTCGCTCATTGGCCTCCGCCGCGAGATGGACGCGCTCTTCAATACCTCCAAGTCCAACAAGCACCTGTGGGAACAGATATCCGCCAAGATGAGGGAGAAGGGTTTTGATCGCTCTCCCACCATGTGCACCGATAAGTGGCGCAACCTCCTGAAGGAGTTCAAGAAGGCCAAGCACCAGGACCGGGGAGGGAGCGGCTCTGCTAAGATGTCGTATTACAAGGAGATTGACGAGATCCTCAGAGAGAGGAACAAGAACGTGCAGTACAAGAGCCCCACTCCTCCGCCAAAGGTTGATTCTTTCATGCAGTTTGCTGATAAAGCTACTGGAAGACCAACACTCAATCTTGAGAGAAGTCTGGATCATGATGGACATCCTCTTGCCATTACCACAGCTGATGCTGTTGCAGCTGGCGGAGTCCCTCCTTGGAATTGGAGAGAGACTTCTGGAAATGGTGGAGAAAGTCAGTCATGTTGTGGAAGGGTTATATCAGTTAAATGGTGTGATTATACAAGACGAATAGGTATTGACGGCACACCAGAAGCCATCAAAGAGGCAATCAGGGCTGCTTTTAGGTTGAGAACTAAACGCACATTTTGGTTGGAGGATGAGGACCAGATTATCCGAAGTATTGACCGTGAAATGCCTATTGGAAGTTACACTCTTCACCTTGATGAAGGAATGGCCATTAAATTATGTCTCTATGACGAGTCTGAGCACCTTCCTGTGCATACTGAAGATAAGGTATTTTACACTGAAAATGATTACCGTGATTTTCTGACCCGGCGGGGTTGGGTATGTCTAAGAGAATTTGACGGATATAGAAATATTGACAATTTGGATGATCTTCGACCTGGTGCTATATATCGTGGTGTGAGTTGA 1095 0.5041 MYLSEKPRPIDFYKEEGARDMMIEVVSNGELAPPPPHHPPPMILGESSGEDPEVEIKAPKKRAETWVQDETRSLIGLRREMDALFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGGSGSAKMSYYKEIDEILRERNKNVQYKSPTPPPKVDSFMQFADKATGRPTLNLERSLDHDGHPLAITTADAVAAGGVPPWNWRETSGNGGESQSCCGRVISVKWCDYTRRIGIDGTPEAIKEAIRAAFRLRTKRTFWLEDEDQIIRSIDREMPIGSYTLHLDEGMAIKLCLYDESEHLPVHTEDKVFYTENDYRDFLTRRGWVCLREFDGYRNIDNLDDLRPGAIYRGVS* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1425 364 CDD GT1 64 129 - -
Vra2g1425 364 ProSiteProfiles Myb-like domain profile. 58 122 IPR001005 -
Vra2g1425 364 Gene3D - 66 128 - -
Vra2g1425 364 SMART sant 62 124 IPR001005 -
Vra2g1425 364 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 5 363 - -
Vra2g1425 364 Pfam Myb/SANT-like DNA-binding domain 65 150 IPR044822 -
Vra2g1425 364 PANTHER - 5 363 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1425 20 363 Trihelix Transcription Factor Family AT3G25990 66.940 9.04e-170 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vra2g1425 Myb_DNA-bind_4 1.8e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1425 - - ccaj:109807736 702.975