Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1418 ATGGAAGAGGAAATCAAATCCGAATTCAAAAGTAGCGGTTTCGACATCGAAGACGAACAAGAAATTCTCAGAAAATGTGTCACTTTCTGCACCAACTACAGTTTCACTCCTTCTGAACTCGTCTCAGGCTGGGAAGTTCATTACCTCAATAGACAGCTGAATGAAGCAATTGTAGAGAGTGCCGAAATTGATGGCTTTCTGTTGCAGCTGCAAAATGAGAAGAAAGAGGACATTATAAAAGAAAGGGAAGAAGGTGGCTTGCATATGTACTCTATCGGTGATGTAGAAATGCACTTAAATAATGATGATGATACAAAGGACGATACTCCTGGAACTCCAATAAATCACCATGATCTTTTATCTCCTTCAACTGATCCGACATCTTTAACGTATGAGAATGTTTTATCTTCTGGGAAAGCATCAAAATCAAAACTAATAACACCCTTTTCAAAGCGAACAGATAGATTTTCAGTGAAAGTTAGCATCAACACTCTCCCTAGTGTAGAGAATGGTAAGCAGGAACCTGATCACGAGTATACTGAGAATGATGAAGATGATGTTGTCAGAAGAGTTCCACAACGTGAAAGGTGTTCATTGGTCATTCGTGGATCAGGACTCAAACCAGGATGTAAATTCATGTATGATAGATTGGAGGATAGGCTTGATGCAATAGAAAACCGAATAAGAAAACATTCAAGGGCATTTGTAGCTTCTGGTCTCTATGAAGAACCAACAGACCCCACATCTGCTTCACAGAGGAGCATTTTTGCTGTTGGCACAATTTTTTGTGATGCCGAAGGACGTTTAAATGAGAAGTCAGTCATGCTGCAGAGCAGTGTTGAGCATTCTGGAGGGGAATGTGTTCGCCTTGACTTGCAACATTTAGACCACTATTCAATTTTTCCTGGCCAGGTAGTTGGTATTAGAGGACATAATCCGAGTGGACATTGCTTTATTGCATCTAAATTGGTGGATCCTATACCTATATCCGTTGCTGACGAGAATTTGAATCCTATGAAGAAGCAAGCTATTGATAAGGAGAGTCAGTCTATTGATACGATTCATAAACAGAGAGAGTTATCAATGATTATTGCCGCTGGTCCCTTTACTACAACAGACAATTTATTGTTTGAGCCTCTTACAGAACTGCTGCAATATGCAAAACGAAGACCACCACAGTTGCTTATATTGCTGGGACCATTTGTGGATTCTGAGCACCCAGATATTAAGAAAGGAACCGTAGACAGGACTTTTGATGAAATATTTCATTTTGAAATCGTGAGGAAGTTGGAAGATTATGTAGAGCGCGTAGGTTCTGGAACACGTGTTCTTCTTGTTCCATCTATACGGGATGCTAACCATGATTTTGTGTTTCCTCAGCCCCCACTGGAAATCAATATATCTGATTTCAAATCTCAGATAGTCAGTCTCACTAATCCTGGAATCTTTGAGGCAAATGAGGTTAAGGTTGGTTGCTGCACGGTGGATGTTCTCAAGCAAATCAGCGGAGAGGAGATATCACGAACTGCAGCAGATGGGAAACCAATTGATCGTATGAGTAGACTTGCAAACCATATCCTCAACCAACAAAGCTTCTATCCACTTTACCCACCCGCAGAAAGTGTCCCCTTGGACTTTTCGCTTGCTCCAGAAGCCCTTCAACTTTCATTGGTTCCGGACGTACTTATCCTACCTTCAGACATCAAGTACTTTGTCAAGGTGCTTAGCAGCGAAAGTGAAGGCATAAATAACACGAAATGCATAGCTGTCAACCCGGGTAGACTTGCCAAGGGAGAAGGAGGCGGAACTTTTGTCGAGCTTGATTATTGTGGGGATTCCAATCTAATTAATGCGTCAATTGTTGGCATATGA 1872 0.4129 MEEEIKSEFKSSGFDIEDEQEILRKCVTFCTNYSFTPSELVSGWEVHYLNRQLNEAIVESAEIDGFLLQLQNEKKEDIIKEREEGGLHMYSIGDVEMHLNNDDDTKDDTPGTPINHHDLLSPSTDPTSLTYENVLSSGKASKSKLITPFSKRTDRFSVKVSINTLPSVENGKQEPDHEYTENDEDDVVRRVPQRERCSLVIRGSGLKPGCKFMYDRLEDRLDAIENRIRKHSRAFVASGLYEEPTDPTSASQRSIFAVGTIFCDAEGRLNEKSVMLQSSVEHSGGECVRLDLQHLDHYSIFPGQVVGIRGHNPSGHCFIASKLVDPIPISVADENLNPMKKQAIDKESQSIDTIHKQRELSMIIAAGPFTTTDNLLFEPLTELLQYAKRRPPQLLILLGPFVDSEHPDIKKGTVDRTFDEIFHFEIVRKLEDYVERVGSGTRVLLVPSIRDANHDFVFPQPPLEINISDFKSQIVSLTNPGIFEANEVKVGCCTVDVLKQISGEEISRTAADGKPIDRMSRLANHILNQQSFYPLYPPAESVPLDFSLAPEALQLSLVPDVLILPSDIKYFVKVLSSESEGINNTKCIAVNPGRLAKGEGGGTFVELDYCGDSNLINASIVGI* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1418 623 Pfam DNA polymerase alpha/epsilon subunit B 363 573 IPR007185 GO:0003677|GO:0006260
Vra2g1418 623 Gene3D - 513 615 - -
Vra2g1418 623 Gene3D - 341 509 - -
Vra2g1418 623 Coils Coil 214 234 - -
Vra2g1418 623 MobiDBLite consensus disorder prediction 100 126 - -
Vra2g1418 623 Gene3D - 1 72 IPR043034 -
Vra2g1418 623 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 609 IPR016722 -
Vra2g1418 623 PIRSF DNA_pol_alpha_2 1 611 IPR016722 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1418 2 623 Core DNA Replication Machinery Family AT1G67630 57.348 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1418 K02321 - gmx:100795306 978.393