Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1385 ATGGATCCAGACGCAGTGGCAAAGGCATTCGTGGATCATTACTATTCAACCTTCGATACCAATCGAAACAATCTCGGCAATCTCTATCAGGAGACTTCCATGCTTTCCTTCGAAGGCCAGAAGATCCAGGGCGCCCACAACATCGTCGCCAAGCTCACTTCCCTTCCCTTCCACCAGTGCCAACATTCCATCACCACCGTCGATTGCCAGCCCTCCGGCGTCGGCGCCGGAGTGCTCGTCTTCGTCAGCGGAAACCTCCAGCTTGCCGGCGAACAGCATGCCCTCAAGTTCAGCCAGATGTTCCATTTGATGCCATCACCGCAGGGAAGCTATTACGTGTTGAATGACATATTCCGGTTGAACTATGCATGA 372 0.5323 MDPDAVAKAFVDHYYSTFDTNRNNLGNLYQETSMLSFEGQKIQGAHNIVAKLTSLPFHQCQHSITTVDCQPSGVGAGVLVFVSGNLQLAGEQHALKFSQMFHLMPSPQGSYYVLNDIFRLNYA* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1385 123 Pfam Nuclear transport factor 2 (NTF2) domain 6 120 IPR002075 -
Vra2g1385 123 Gene3D - 1 123 - -
Vra2g1385 123 PANTHER NUCLEAR TRANSPORT FACTOR 2 1 123 IPR045875 GO:0006913
Vra2g1385 123 SUPERFAMILY NTF2-like 3 121 IPR032710 -
Vra2g1385 123 PANTHER NUCLEAR TRANSPORT FACTOR 2B 1 123 - -
Vra2g1385 123 CDD NTF2 2 122 IPR018222 -
Vra2g1385 123 ProSiteProfiles Nuclear transport factor 2 domain profile. 6 120 IPR018222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1385 Vra-Chr2 22118266 22119588 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1385 2 85 MAP Kinase Kinase Gene Family AT5G40440 31.731 5.93e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1385 - - gmx:100500395 230.72