Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1378 ATGATGTTGAAATCCTTATGGAAAAGCCTGATAAGCCTTCAAGATAAGTGTGTGAAGAAGCAAAAGAGTGAAGTTGATGGAAGTGTGTCAGTGCATGGTGAAGAAGACTTGGTCGTTTTGCCTGTGCAGTGTTGCAACTGTTGCATAGAAGAAACCAAACAATGCAATTGTGACCATACTCATGCAGCAGAAGACGCAAATATCCACGCTCAGCGTCATGCTAACTCCAACAGTTCCTTTACTCATGCTGTCATCAACATGGTGGGGATGCTCGTAGGTTTGGGGCAACTATCAACTCCATATGCAGTGGTAAGTGGAGGGTGGGTGTCTGCATTCTTGCTTGTAGGACTAGGTGTAATGTGTGCTTACAGTTCTCACATACTTGGAACATGCCTCAGAAAGAATCCAAAGTTAAGAAGCTTTGTGGATATTGGGAAACATGCNTTTGGATCAAAAGGAANGTTGGTGGCTGCAACAATCATCTACATGGAAATCTTCATGTCCCTTGTTTCCTACACCATCTCATTACATGATAATTTGAACACAGTCTTTCTGGGGACAAATCTCAAGNACCACTTCCCCANATTCTCTTCATCTCAGTTCCTAACAGTGGTGGCAGTTCTCATTGCCCTCCCTAGTTTGTGGATCAGAGACCTCTCTTCCATATCTTTCCTTTCAACACTTGGNATTCTCATGTCTCTCCTCATTTTTCTCTGTGTAGCTGCCACTGCACTTTTAGGACATGTCCGAAACAATCATGCCATACCTGTCCTCCAACTCCATAATATTCCATCAGTATCTGGCCTTTACGTCTTTGGCTATGGAGGACACATTGTTTTCCCCGAATTATACACATCCATGAAAGACCCTTCAAAATTTACCAAGGTTTCTATTATGAGCTTCGCAGTGGTTACGNCAATTTACACGACACTGGGGTTCATGGGTGCGAGGATGTTTGGTAAGGATGTAAAGTCTCAAATAACTCTGAGCATGCCAGCAGAGAGCATTGTGACAAAGGTTGCTCTGTGGGCAACCGTGGTGGCACCAATGACCAAATACGCGCTTGAATTCACACCATTGGCAATTCAACTAGAACATGCTCTTCCAAGCACCATGAGTGNCAGAAGCAAGATGATTATTAGGGGTTCCGTGGGTTCANTTTCACTTTTGGTCATACTAACCCTTGCTCTGTCGGTTCCATATTTTGAACATGTACTAAGTCTCACTGGTTCCCTTGTCAGTGTTGCCGTTTGTTTGATTCTGCCATGTTCTTTCTACTTGAAGACATGTTGGGGTCAAATATCAAACCTTGTCTTGCTCCTTAACCTCTTTCTCATCACATTTGGCTTTCTTCTTGCTCTCATGGGCACCATTTCCTCCTCAAAGTTGCTACTCAAAAGTTTTCAATTGCATCACTCAAGTTAA 1425 0.4302 MMLKSLWKSLISLQDKCVKKQKSEVDGSVSVHGEEDLVVLPVQCCNCCIEETKQCNCDHTHAAEDANIHAQRHANSNSSFTHAVINMVGMLVGLGQLSTPYAVVSGGWVSAFLLVGLGVMCAYSSHILGTCLRKNPKLRSFVDIGKHAFGSKGXLVAATIIYMEIFMSLVSYTISLHDNLNTVFLGTNLKXHFPXFSSSQFLTVVAVLIALPSLWIRDLSSISFLSTLGILMSLLIFLCVAATALLGHVRNNHAIPVLQLHNIPSVSGLYVFGYGGHIVFPELYTSMKDPSKFTKVSIMSFAVVTXIYTTLGFMGARMFGKDVKSQITLSMPAESIVTKVALWATVVAPMTKYALEFTPLAIQLEHALPSTMSXRSKMIIRGSVGSXSLLVILTLALSVPYFEHVLSLTGSLVSVAVCLILPCSFYLKTCWGQISNLVLLLNLFLITFGFLLALMGTISSSKLLLKSFQLHHSS* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1378 474 PANTHER OS05G0424000 PROTEIN-RELATED 28 470 - -
Vra2g1378 474 PANTHER AMINO ACID TRANSPORTER AVT1H 28 470 - -
Vra2g1378 474 Pfam Transmembrane amino acid transporter protein 77 458 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1378 Vra-Chr2 22084286 22086991 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1378 45 472 Amino Acid or Auxin Permease AAAP Family AT5G16740 59.207 9.45e-172 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1378 - - gmx:100790897 719.924