Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1376 ATGGTGAAGTTCAACTTGGTCATGATTTGCTTTTCTGTCATGTTATATGCTGTTATTGCATTGAACACTGATGGGGTGGCTCTTCTGTCACTCCAGAAGCATTGGACATTTGTTCCTACTTCCATAAACTTGAGTTGGAATGCTTCTGATTCCACTCCATGCTCTTGGTTAGGAGTCCAGTGTGACAATAACCATAGTACAATCTATCTTAACCTCTCTGGAAACTCAATTTCAGGTCTTTTGGGACCTGAAATAGGACACTTGAGTCACTTGCAAACACTTGATTTGTCCTCAAACAACTTCTCAGGGAGCATACCTCCTGAGTTAGGAAATTGTAGTCTGCTTCAGAACCTTGACCTTTCTTATAACAGTATCACAGGAAACATACCTGATAGTTTGAGAAACTTGCAGAATTTAGTCTCTTTCAGTAGTATGTACAATGGGATTACTGGTCAAATTCCTGAATTCTTGTTTCAACTTCAACACTTGGAAGATCTTCTCCTGAACCAAAACTCTTTGTCTGGTTCCATTCCAATGAATGTTGGGAACGGTACAGAAATTGTGACACTGTATCTGGATCGTAATCAGTTGTCAGGAATGATTCCACCGTCCATTGGAAACTGCAGTAAATTAGTGGAGCTGTATTTGGACTATAACCAGTTTCATGGAGTTCTACCTGATAGTGTTAACAATCTTCACAGTGTTGTTAAGTTGAGTTTCAGTAATAATAGACTGGAGGGTACCATTCCCTTATTGGGATCTATCACATGTAAAACTTTACAATATTTGGACCTGTCAGTGAACAAATTTAGTGGAGGCATACCTTCAACCTTGGGGAATTGCAGTGGATTGACAGCAATTTATGCTTTCAATACAAGTTTAGGAGGCAGCATTCCATCATCTTTAGGCCAATTAACACAACTTTCTGTTCTTCGCCTTGAAACCAATCATTTGTCTGGTAAAATACCTTCAGAAATTGGTAATTGTAGGTCATTACAACAGTTGATGTTGAATAACAATGAACTTGAGGGAGAGATTCCAAGTGAATTAGGAAAGCTAAGTCAGTTGCAAGATCTTAGACTTCATTTCAACAATTTGACAGGTGGAATTCCAGTGAGCATTTGGAAAATTTCCAGCCTTCAGCAACTGCATGTGTATTACAATAACCTTTCTGGTGAGGTTCCTTTAGAATTAGCAGAACTCAAACAACTGAGAAAACTTGGCTTATACCACAATCGGTTCTCTGGAGTCATTCCTCTAAACTTAGGAATCAATAGCAGTTTAGTGGAGATTGATCTCTCATATAATCTTTTCACTGGAAACATCCCAGCTAATCTCTGCTTTGGACAACAATTACTTAGGCTAGTCCTTGCTTCAAATCAATTGCAAGGTGGTATTCCTCCTGAAATGGGAAGATGCACAACACTTACTAGGTTAAGGCTTGATGGAAACAACTTAACTGGACCTTTACCTGTTTTTACAAGCAATTGCAGTCTCACCTACATGGACTTGAGTGGGAACAATATCAATGGAACAATTCCATCAAGTTTGGGAAACTGCATAAATCTTACTACTGTTATTTTTTCTCACAACAATCTTTCTGGGATCATACCCTTTGGGCTAGGAAACCTTGTGAACCTTCAAAGGTTGAACCTTTCTCAAAACAAATTAGGAGGTCCTTTACCACATGAGCTGTCAAACTGTAAGAAAATGCAGTACTTTGATGCTGGATTCAATTCTCTAAATGGTTCATTCCCATCTAGTTTGAGAACTTGGACAGGGTTGGCAACATTGAATTTAAGGGACAATCATTTCACTGGGGGTATCCCAACTTTCTTATCAGAATTTGAAGGCCTTTATGATCTACATCTTGGGGGAAATGTTTTTGGAGGCCAAATTCCTAGATCAATTGGTGGGTTGAAAAATCTTTTTTATGAGTTGAATCTAAGTGCTAATGGGCTGACAGGTGAAATTCCTCCTGAGATTGGAAAACTGACATTGCTGCAAAGCCTGGATATTTCTCTCAACAATCTGACTGGAAAAATTGAAGTTCTTAAAGATCTCTCTTCATTGATTGAACTCAATATTTCATACAATTCTTTTTCTGGTCCTCTTCCAGACACACTGGTGAACTTGCTCCATTCTTCTCCCTCATCATTCTTGGGAGTTCCTGGCTTATGTGTTAGATGTTTACCATCAAATTGTTCCAAAAGTAACAGCTTGAAGCCGTGTGATGAGAACAACACTACACATCCAAAAGGGCCGAGTAAAATTAAAGTTATGTTGATAGCAGTTGGATCTGCACTACTGATATCAATTCTGTTACTTGGTCTTGTTTACCTGATATACTACAAGCAAGATGTGAAGATTTTTCCCGAACAGCGATCATCAACTTTGCTCAAGAAGGTGATGAAGGTCACAGAGAACCTAAATGATAGGCATATTATTGGGAGAGGAGCTCATGGAGTTATTTACAAAGTTGAATTCAGTCTGGACAATGTTTTTGTCATAAAGAAATTTCCCTTTGCAGATAACAAGAAACTGATCACTAGCATGACCGCAGAGATTGAAACCACTGGGAAGATAAGGCATAGAAATCTAGTGAGAATAAAAAACTTCTGGTTAAAAAAGGACTTTGGTCTAATCATGTACAAGTACATGGAAAATGGAAGTCTTCATGATCTTCTGCATGAGAAGTTTCCACAACCACCTTTAGAGTGGAATGTTCGCTATACAATTGCAGTTGGAATTGCACATGGACTTGAATACCTCCATCATGATTGTGACCCTTTCATAGTGCACAGAGACATCAAACCAAAGAATATACTTTTGAATTCTGATATGGAACCTCGTATTGCTGATTTTGGCATTGCAAGGCTTCTAGACCATTCCTCTTATTCATTGCAATCTGTGTCTGTTCCTGGTACAGTAGGGTACATTGCACCAGAGAATGCTTATTCAACAGTGATGAGTAGGAAGAGTGATGTGTATAGTTATGGAGTGGTTTTGCTAGAGCTGATATGCAGAAAGAAGGTGGTAGATGATCTTTCATTTGTGGAAGGAACAGATCTTGTGGGGTGGGTTAGATGTATCTGGGAAAAAACAAAAGGCATTGATGGAATTGTTGACTCAGGGCTTGAAGAGGAACTTTTGGATTCAAATTTGAGGGAACAAGTTGAACAAGTGCTCTTGATGGCTTTGAGATGTACTGATGAGCATCCAGGAAAGAGACCAACGATGAGAGAAGTGGTCAAGGAGCTGATAGTTAGATGCAAAGATATTGACATGAAGAAGAGTAGCTAA 3303 0.3887 MVKFNLVMICFSVMLYAVIALNTDGVALLSLQKHWTFVPTSINLSWNASDSTPCSWLGVQCDNNHSTIYLNLSGNSISGLLGPEIGHLSHLQTLDLSSNNFSGSIPPELGNCSLLQNLDLSYNSITGNIPDSLRNLQNLVSFSSMYNGITGQIPEFLFQLQHLEDLLLNQNSLSGSIPMNVGNGTEIVTLYLDRNQLSGMIPPSIGNCSKLVELYLDYNQFHGVLPDSVNNLHSVVKLSFSNNRLEGTIPLLGSITCKTLQYLDLSVNKFSGGIPSTLGNCSGLTAIYAFNTSLGGSIPSSLGQLTQLSVLRLETNHLSGKIPSEIGNCRSLQQLMLNNNELEGEIPSELGKLSQLQDLRLHFNNLTGGIPVSIWKISSLQQLHVYYNNLSGEVPLELAELKQLRKLGLYHNRFSGVIPLNLGINSSLVEIDLSYNLFTGNIPANLCFGQQLLRLVLASNQLQGGIPPEMGRCTTLTRLRLDGNNLTGPLPVFTSNCSLTYMDLSGNNINGTIPSSLGNCINLTTVIFSHNNLSGIIPFGLGNLVNLQRLNLSQNKLGGPLPHELSNCKKMQYFDAGFNSLNGSFPSSLRTWTGLATLNLRDNHFTGGIPTFLSEFEGLYDLHLGGNVFGGQIPRSIGGLKNLFYELNLSANGLTGEIPPEIGKLTLLQSLDISLNNLTGKIEVLKDLSSLIELNISYNSFSGPLPDTLVNLLHSSPSSFLGVPGLCVRCLPSNCSKSNSLKPCDENNTTHPKGPSKIKVMLIAVGSALLISILLLGLVYLIYYKQDVKIFPEQRSSTLLKKVMKVTENLNDRHIIGRGAHGVIYKVEFSLDNVFVIKKFPFADNKKLITSMTAEIETTGKIRHRNLVRIKNFWLKKDFGLIMYKYMENGSLHDLLHEKFPQPPLEWNVRYTIAVGIAHGLEYLHHDCDPFIVHRDIKPKNILLNSDMEPRIADFGIARLLDHSSYSLQSVSVPGTVGYIAPENAYSTVMSRKSDVYSYGVVLLELICRKKVVDDLSFVEGTDLVGWVRCIWEKTKGIDGIVDSGLEEELLDSNLREQVEQVLLMALRCTDEHPGKRPTMREVVKELIVRCKDIDMKKSS* 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1376 1100 Pfam Leucine rich repeat N-terminal domain 22 62 IPR013210 -
Vra2g1376 1100 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 1085 - -
Vra2g1376 1100 Gene3D Ribonuclease Inhibitor 497 743 IPR032675 -
Vra2g1376 1100 ProSiteProfiles Protein kinase domain profile. 810 1089 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra2g1376 1100 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 4 1085 - -
Vra2g1376 1100 Gene3D Ribonuclease Inhibitor 21 180 IPR032675 -
Vra2g1376 1100 SMART LRR_typ_2 160 184 IPR003591 -
Vra2g1376 1100 SMART LRR_typ_2 688 711 IPR003591 -
Vra2g1376 1100 SMART LRR_typ_2 544 568 IPR003591 -
Vra2g1376 1100 SMART LRR_typ_2 305 329 IPR003591 -
Vra2g1376 1100 SMART LRR_typ_2 208 231 IPR003591 -
Vra2g1376 1100 SMART LRR_typ_2 353 377 IPR003591 -
Vra2g1376 1100 SMART LRR_typ_2 88 112 IPR003591 -
Vra2g1376 1100 SMART LRR_typ_2 401 425 IPR003591 -
Vra2g1376 1100 SMART LRR_typ_2 640 665 IPR003591 -
Vra2g1376 1100 ProSitePatterns Serine/Threonine protein kinases active-site signature. 932 944 IPR008271 GO:0004672|GO:0006468
Vra2g1376 1100 Gene3D Transferase(Phosphotransferase) domain 1 887 1098 - -
Vra2g1376 1100 Pfam Protein kinase domain 813 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra2g1376 1100 Pfam Leucine Rich repeat 87 103 IPR001611 GO:0005515
Vra2g1376 1100 Gene3D Ribonuclease Inhibitor 424 496 IPR032675 -
Vra2g1376 1100 Gene3D Ribonuclease Inhibitor 181 253 IPR032675 -
Vra2g1376 1100 SUPERFAMILY L domain-like 41 141 - -
Vra2g1376 1100 SUPERFAMILY RNI-like 427 715 - -
Vra2g1376 1100 SUPERFAMILY Protein kinase-like (PK-like) 794 1088 IPR011009 -
Vra2g1376 1100 Pfam Leucine rich repeat 498 557 IPR001611 GO:0005515
Vra2g1376 1100 SMART serkin_6 810 1088 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra2g1376 1100 Gene3D Phosphorylase Kinase; domain 1 782 886 - -
Vra2g1376 1100 SUPERFAMILY RNI-like 146 487 - -
Vra2g1376 1100 ProSitePatterns Protein kinases ATP-binding region signature. 816 839 IPR017441 GO:0005524
Vra2g1376 1100 Pfam Leucine Rich Repeat 115 136 IPR001611 GO:0005515
Vra2g1376 1100 Gene3D Ribonuclease Inhibitor 254 423 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1376 Vra-Chr2 22036899 22040345 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1376 12 1087 Receptor kinase-like Gene Family AT1G73080 49.772 0.0 983
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vra2g1376 Pkinase 2.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1376 - - vun:114170650 1925.6