Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1290 ATGTCGCAGAACAACTCTAAACCCCCTATCATCATCACTCACGACAGGGCTAATGCCTTCAAAACGCATGAAATGGAAGTCACCGATGGCTACAACATCATCGACAATGTCTCCACCTTCACAAGCCGCCACCAAAAAGGCATATGCATCATGAGCGGCACCGGAACCGCCCCCAAAAAGGCATATGTGCCTTCAGTCTCGCCAACTGCTACCACCTTGACCATACCTAGTGTAGGACAATGGTTTCTGTTGTGGAAGGAGAGTGCCGGTGAGGAGGGTGGTTGTTGCGGTGGGGGATTAGGTTGTTGCGAGGGGTCTATTCGAAGGGGTTTCTTGACGAGGTTTCTATCGCGGTGTCATGAGGATGGTGTGGCGGCATGA 381 0.5197 MSQNNSKPPIIITHDRANAFKTHEMEVTDGYNIIDNVSTFTSRHQKGICIMSGTGTAPKKAYVPSVSPTATTLTIPSVGQWFLLWKESAGEEGGCCGGGLGCCEGSIRRGFLTRFLSRCHEDGVAA* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1290 126 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 2 57 - -
Vra2g1290 126 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 2 57 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1290 Vra-Chr2 19718800 19720039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1290 2 56 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 56.364 1.97e-17 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1290 - - vra:106753027 243.817