Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1266 ATGACCGGCAAAGAAATCCTTCATAAGATGAAGGAAAAAGTTTTGGGGCCATCTGATTCTGATTCAGGTAAAGGAAAGAGCAAGATGAAGAAGCACATTACTCATGGCTTTCACTTGGTAAAGGGAAGATCTGGTCATGCCATGGAAGACTATGTTGTTGCTCAGTTTAAGCAAGTTGATAACAATGAATTGGGCTTATTTGCTATATTTGATGGCCACTCAGGTCAAAGTGTGCCTGATTACTTGAAAACTCATTTGTTTGATAACATCTTGAAAGAGCCTAAGTTCTGGACAGAACCTGCTGATGCTGTGAAGAGTGCATATAGTATAACTGATTCTACTATTTTAGACAAATCAGGTGAACTGGGTCGAGGGGGTTCAACTGCAGTTACTGCAATATTGATCAACTGTCAGAAGTTAGTAGTGGCCAATATTGGAGATTCCAGGGCTGTCTTGTGCCAGAATGGCCAGGCCAAACAACTATCAGTGGATCATGAACCAAGTGTAGAAAGTGAGGATATAAAAAACAGAGGTGGTTTTGTGTCAAACTTCCCAGGGGACGTTCCACGAGTTGATGGTCAGTTGGCAGTCTCAAGGGCATTCGGTGACAAAAGCCTGAAGGTACACTTGAGCTCAGAACCACATGTGATTGTGGAGTTGATAGGTGATGATGCAGAGTTTGTTATCTTAGCCAGTGATGGGTTATGGAAGGTGATGACAAATCAAGAAGCAGTTGATGCAATCAGAGATGTTAAGGATGCTCGCTCTGCAGCAAAGATCCTTACTGAAGAAGCACTTAACAGGAAAAGCTCAGATGATATCTCTTGTGTTGTTGTGAAATTTCAGTGA 849 0.4193 MTGKEILHKMKEKVLGPSDSDSGKGKSKMKKHITHGFHLVKGRSGHAMEDYVVAQFKQVDNNELGLFAIFDGHSGQSVPDYLKTHLFDNILKEPKFWTEPADAVKSAYSITDSTILDKSGELGRGGSTAVTAILINCQKLVVANIGDSRAVLCQNGQAKQLSVDHEPSVESEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKVHLSSEPHVIVELIGDDAEFVILASDGLWKVMTNQEAVDAIRDVKDARSAAKILTEEALNRKSSDDISCVVVKFQ* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1266 282 Gene3D - 15 282 IPR036457 -
Vra2g1266 282 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 282 - -
Vra2g1266 282 SUPERFAMILY PP2C-like 29 281 IPR036457 -
Vra2g1266 282 CDD PP2Cc 35 281 IPR001932 -
Vra2g1266 282 Pfam Protein phosphatase 2C 47 274 IPR001932 -
Vra2g1266 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Vra2g1266 282 MobiDBLite consensus disorder prediction 8 27 - -
Vra2g1266 282 MobiDBLite consensus disorder prediction 8 28 - -
Vra2g1266 282 PANTHER PROTEIN PHOSPHATASE 2C 1 282 IPR015655 GO:0004722|GO:0006470
Vra2g1266 282 SMART PP2C_4 24 279 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1266 Vra-Chr2 18311129 18315415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1266 1 282 PP2C-type Phosphatase Gene Family AT3G15260 76.125 1.85e-162 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1266 K17506 - gmx:100787942 508.064