Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra2g1255 | ATGGGATTAACTTCTTCTACTCTGACATCCTTCACATCATTCCTTTGCCTCTATGTGTTTTGTGTTAATGCAGTCACCTACAAAGAAATTTTGCAAACAGGACAATCACTGGGAACCTCAGACTCGGTTGTTTCTGATAGCGGGAAGTTTGAATTGTGTTTTTTCAACAGAGTCAGAGATAATTCAACCAAGTACTACGTTGGTATACGGTATAAAAGGGTTCCAAACGACAAGAACAAGATTGTGTGGGTTGCAAACCGAGACTACGCACTTGAAACATCCTCAGCAGTTCTCACCTTTGAACCTGATGGAAATTTTGTGATCATGGATGGACAAGTCACATACCGTGTCAACAAGGTTTCAAACAATTTCAGTATCTATGCCATGCTCTTGGATTCAGGAAACTTGATACTGCTTAAAACCTCAAATAAACAGATTTTGTGGCAGAGTTTTGATCATCCGACGGACACCCTTTTACCCGGAATGAAACTAGGACATGATGAAGGAAACACTTGGTCATTGCGATCATGGACAAGTGCAGATGACCCTGCTCCAGGAGCTTTTTCCCTCGAATATAATCTGGGCAGGGTCAGCCTAATCATCAACAATGGCTCTAATGCGTTCTGGATTGACGACCACTACAACGATACTATTGGCAATTTTATTCGCCGAAGTGGTGTGTCTATGGACAGCTATTTCACTTTGCCAGTTGGTAATGACTCTAGGTTGGTACTAGAAGTGTCTGGTGAGCTCAACCAGGAATATTGGTCTGATGAACAACAACATTGGGTTTCTATTCAGTCATCCAAGTGTGCTAATAATTCGTGTGGAGCCTTTTCCATCTGTAACCCGAAAGCTCGTGACCCTTGTGACTGTCTTTATGGTTTCAGGCCCTCTGATGCTGATTCTTGGAACAATGGGAACAAATCTGCTGGCTGTGTAAGGAACAAAGACTTATCGTCCTGCAGTATCGGTGCTGAATCCAACAACGATAAATTCAAGCAACTATATAATGTCAAATCACCAACTTTGGACAGTCTCAGGACGATCAATACAACAAAAGAGTGTGAAAGTACTTGTTCTAGAAATTGTTCTTGCCTTGCTTTCGCTTATTATTTGAACGGTGATTGCCAGTTGTGGCTTGGTTCTGTATTGAATTTAAAGAACGTCTCAACAGATGTGGACAATTCTGATAATAGCAATCCAATTTTTTACCTAAGACTTGCTGCCTCAGAATTAGATGATTCTGGTTCGAACAAAACAAGAGCAAAAGAACCAGGATATACTGTCAACAAAAATGTACTTCTTCTGATTGTTATATTGATCTCCTTTCTAGCTTTTCTTATATTGGGCATTTTAGTTTACTGGATTAGAAAGAAGAGGAGAAAAGGGGAAGATTTGCTCCATTTTGATATAAGCATGAGCATGAAAGTTGAAGATTCTGAGCTTACTGAATCAGATAGGAGTGCCAAAGTGAAGAAGGAAGTGAAATTGCCTTTATTCAGTTTCGAGAGTGTTGCAGCTGCAACTGATAATTTCTCAGATGCAAATAAACTTGGTGAGGGGGGCTTTGGACCCGTTTACAAGGGTACATTATTTAATGGGGATGAGGTTGCGGTGAAAAGACTGTCACGGAGATCTGGTCAAGGATGGGAAGAGTTGAGAAATGAAGCTTTGTTAATTGCAAAACTTCAACACAACAATCTTGTTAGACTTCTTGGTTGCTGCATTGATCGAAATGAAAAGATGCTGATTTATGAATTCATGCCTAATAAAAGCTTGGATCTTTTCCTTTTTGATGCTACAAAGAAACAGATGTTAGATTGGGGAACTAGAGTCAGAATAATCGATGGGATTGCGCAAGGAATTCTTTATCTTCATCAGTATTCCAGGTTCAGGATCATTCACCGAGATTTAAAAGCTAGCAACATATTGTTGGACAGCCATATGAATCCAAAAATATCAGATTTTGGATTGGCAAAAATATTTGGTGATAATGAACTTCAAGCAAATACAAATCGAATCGTTGGAACATATGGTTACATGGCTCCTGAATATGCTATAGAAGGACTTTTCTCAGTAAAATCAGACGTATTTAGTTTTGGGGTCCTTTTGTTGGAGATTGTAAGTGGCAAGAAGAATACTGGCTTTTATCAAACGAGTTCCTTCAATCTTCTTGGATATGCTTGGGATCTTTGGACAAGAAATTCAGGACTGGATCTAATGGATAGTGCATTGGATGACAGTGATACTTTAAGTAATAACAGTATGCATACTGTGCCAAGATATGTGAACATAGGACTTCTTTGCGTTCAAGAAAGTCCAGAAGATAGGCCAACCATGTCTGATGTTGTATCAATGATTGGGAATGACACTGTGCCCCTTCCTTCTCCTAAACCACCTGCATTTCTTAATGTCAGAGGTGATCATAGTTCATCATTGCCCTCCACCTCCACAGAAAGATTTTCAGTGAATGTTATCACAGATACAATTCTGGAAGCGAGATGA | 2508 | 0.3963 | MGLTSSTLTSFTSFLCLYVFCVNAVTYKEILQTGQSLGTSDSVVSDSGKFELCFFNRVRDNSTKYYVGIRYKRVPNDKNKIVWVANRDYALETSSAVLTFEPDGNFVIMDGQVTYRVNKVSNNFSIYAMLLDSGNLILLKTSNKQILWQSFDHPTDTLLPGMKLGHDEGNTWSLRSWTSADDPAPGAFSLEYNLGRVSLIINNGSNAFWIDDHYNDTIGNFIRRSGVSMDSYFTLPVGNDSRLVLEVSGELNQEYWSDEQQHWVSIQSSKCANNSCGAFSICNPKARDPCDCLYGFRPSDADSWNNGNKSAGCVRNKDLSSCSIGAESNNDKFKQLYNVKSPTLDSLRTINTTKECESTCSRNCSCLAFAYYLNGDCQLWLGSVLNLKNVSTDVDNSDNSNPIFYLRLAASELDDSGSNKTRAKEPGYTVNKNVLLLIVILISFLAFLILGILVYWIRKKRRKGEDLLHFDISMSMKVEDSELTESDRSAKVKKEVKLPLFSFESVAAATDNFSDANKLGEGGFGPVYKGTLFNGDEVAVKRLSRRSGQGWEELRNEALLIAKLQHNNLVRLLGCCIDRNEKMLIYEFMPNKSLDLFLFDATKKQMLDWGTRVRIIDGIAQGILYLHQYSRFRIIHRDLKASNILLDSHMNPKISDFGLAKIFGDNELQANTNRIVGTYGYMAPEYAIEGLFSVKSDVFSFGVLLLEIVSGKKNTGFYQTSSFNLLGYAWDLWTRNSGLDLMDSALDDSDTLSNNSMHTVPRYVNIGLLCVQESPEDRPTMSDVVSMIGNDTVPLPSPKPPAFLNVRGDHSSSLPSTSTERFSVNVITDTILEAR* | 836 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra2g1255 | 835 | Pfam | S-locus glycoprotein domain | 220 | 299 | IPR000858 | GO:0048544 | |
Vra2g1255 | 835 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 634 | 646 | IPR008271 | GO:0004672|GO:0006468 | |
Vra2g1255 | 835 | ProSiteProfiles | PAN/Apple domain profile. | 322 | 409 | IPR003609 | - | |
Vra2g1255 | 835 | CDD | B_lectin | 29 | 154 | IPR001480 | - | |
Vra2g1255 | 835 | SUPERFAMILY | Protein kinase-like (PK-like) | 499 | 820 | IPR011009 | - | |
Vra2g1255 | 835 | Pfam | Protein tyrosine and serine/threonine kinase | 517 | 787 | IPR001245 | GO:0004672|GO:0006468 | |
Vra2g1255 | 835 | Gene3D | Phosphorylase Kinase; domain 1 | 487 | 588 | - | - | |
Vra2g1255 | 835 | ProSiteProfiles | Protein kinase domain profile. | 513 | 793 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra2g1255 | 835 | CDD | PAN_AP_plant | 320 | 409 | - | - | |
Vra2g1255 | 835 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 25 | 831 | - | - | |
Vra2g1255 | 835 | Pfam | PAN-like domain | 327 | 386 | IPR003609 | - | |
Vra2g1255 | 835 | PIRSF | SRK | 2 | 835 | IPR024171 | GO:0004674 | |
Vra2g1255 | 835 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 81 | 183 | IPR036426 | - | |
Vra2g1255 | 835 | SMART | ntp_6 | 328 | 400 | IPR003609 | - | |
Vra2g1255 | 835 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 ISOFORM X1 | 25 | 831 | - | - | |
Vra2g1255 | 835 | ProSiteProfiles | Bulb-type lectin domain profile. | 28 | 151 | IPR001480 | - | |
Vra2g1255 | 835 | SMART | blect_4 | 28 | 154 | IPR001480 | - | |
Vra2g1255 | 835 | Pfam | Domain of unknown function (DUF3403) | 790 | 835 | IPR021820 | GO:0004674 | |
Vra2g1255 | 835 | Gene3D | Transferase(Phosphotransferase) domain 1 | 589 | 793 | - | - | |
Vra2g1255 | 835 | CDD | STKc_IRAK | 519 | 788 | - | - | |
Vra2g1255 | 835 | Gene3D | - | 23 | 152 | IPR036426 | - | |
Vra2g1255 | 835 | SMART | serkin_6 | 513 | 788 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra2g1255 | 835 | Pfam | D-mannose binding lectin | 81 | 177 | IPR001480 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra2g1255 | Vra-Chr2 | 18052588 | 18056456 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra2g1255 | 410 | 804 | Receptor kinase-like Gene Family | AT4G23190 | 50.125 | 1.05e-125 | 388 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Vra2g1255 | PK_Tyr_Ser-Thr | 2.7e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra2g1255 | - | - | pvu:PHAVU_011G149500g | 1206.82 |