Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1187 ATGGAGCAGGAGATAGAGAACATAGAATCTCAAACTTCCTACATAACAACATTACAAGGCGAAGCACCTGACATCTCTTGCAAGGGGAATCCCTCCGTAACTCTAAAGTTCCGCGATGTTACTTACAAAATTAAGAGCAGAAAGGGGGGATTTCTGAAGAGCAAAATAGAAGAGAAAGTAGTTCTGAATGGAGTGGCAGGAATGGTTAAACCTGGTGAAATTCTTGCCATGTTAGGTCCCTCTGGGAGTGGCAAAACTACTTTGCTAGCAGCATTGGGAGGCAAGCTTGGTGGGAAACTCTATGGAAGCATAACATATAATGGCAAAGGCTTCTCAAATGCAATGAAGAGGAAAACAGGTTTTGTGACACAAGCTGATATTCTCTATCCCCACTTGACTGTGACTGAAACTCTAGTGTTCACAGCCTTTCTCAGATTGCCAAGCAGTTTATCCAAAAAGGAGAAAATTCAGCATGCAAAAGCTGTGATGGCTCAACTTGGTTTAACCAAGTGCAAGGACAGCATCATTGGAAGCCCAGTTCTTAGAGGTGTTTCTGGTGGGGAGAAAAAAAGGGTTAGTATTGGACAAGAAATTCTCATAAACCCAAGCTTGCTATTTCTGGATGAGCCAACCTCTGGCCTAGACTCAACAACAGCTCAAAGAATTGTCTCAATTTTGTGGGAACTAGCAAATGGAGGGAGAACCGTTGTCATGACCATACATCAACCTTCAAGTAGGATTTACTGCATGTTTCACAGGGTGTTACTGCTTTCAGAAGGAAACCTACTATATTATGGAAATGGATCTCAAGCTATGGAATATTTTACTAATATTGGATTTGCCCCTACCATGCCATTCAACCCCTCAGATTTCCTTTTGGATCTTGCAAATGGTGTCTACACTGGTCAATCGAATGAGGACAATGCCTTAAATAAGAACAAATTGATTTCTGCATATAGGAACTACTTTGATGTCAAATTTAAGCCAGTGATACAAGAAATTCCAGACTACGATAAAACTCAGGGTAGATTTGAAAGCAATAAATTTGGGGAATGGCCTACCAGTTGGTCAAATCAGTTTCTTGTACTGCTAAAAAGAGATGTCAAAGAGAGAAAATATGCATCATTTTCTGGCCTGAGGGTTTGTCAGGTTCTTCTGGTTGCTCTTATTACAGCGTTACTATGGTATAAGTGTGATGTTTCACGCTTGCAGGATCAGATTGGAATTCTATTCTTCCTTACTAGCTTTTGGGGTAGCATGCCTCTTTATCAAGCAATATTCACTTTCCCCCAAGAGCTAATGATCCTTGAGAAGGAACGATCCTCTGGAATGTACAAGCTCTCATCATACTTCATTTCAAGGATGGTTGCTGACCTTCCAATGGAGCTCGTGCTTCCTACCATATTCATCACCATAATCTATTGGGTGGTAGGGTTGAAAAACAATGTGGTAAATTTCTTATGCACACTTGTCATTATTGTACTCGATGTGTTGGTTTCACAAGGACTAGGCCTTGCCATTGGTGCTATTGTAATGGACCAGAAATCCGCAACCACACTGGCCTCAGTGATTATGCTAACTTCTATTTTGGTTAGTGGATACTATATTCAACATATGCCAAAATTTGTATCATGGCTCAAGTACTTCTCCATTAACTACTACATATACCATCTCCTGATGGGGTCTCAATATAGCTCAAGTGACACATACCCATGTTCTCATGGAAAGTGTTTGGTTGCAGAATATCCTTTGATAGAACAAAAGGGGTTACATTTTCAAGGGAAACTCACGGCTGCATCGGCTCTATTCATAATGCTTATAGGATACAGATTAGTGGCTTATTTGGCTCTCATGAAAATTGGGAACACAAAGAAAATGCGATAA 1884 0.4055 MEQEIENIESQTSYITTLQGEAPDISCKGNPSVTLKFRDVTYKIKSRKGGFLKSKIEEKVVLNGVAGMVKPGEILAMLGPSGSGKTTLLAALGGKLGGKLYGSITYNGKGFSNAMKRKTGFVTQADILYPHLTVTETLVFTAFLRLPSSLSKKEKIQHAKAVMAQLGLTKCKDSIIGSPVLRGVSGGEKKRVSIGQEILINPSLLFLDEPTSGLDSTTAQRIVSILWELANGGRTVVMTIHQPSSRIYCMFHRVLLLSEGNLLYYGNGSQAMEYFTNIGFAPTMPFNPSDFLLDLANGVYTGQSNEDNALNKNKLISAYRNYFDVKFKPVIQEIPDYDKTQGRFESNKFGEWPTSWSNQFLVLLKRDVKERKYASFSGLRVCQVLLVALITALLWYKCDVSRLQDQIGILFFLTSFWGSMPLYQAIFTFPQELMILEKERSSGMYKLSSYFISRMVADLPMELVLPTIFITIIYWVVGLKNNVVNFLCTLVIIVLDVLVSQGLGLAIGAIVMDQKSATTLASVIMLTSILVSGYYIQHMPKFVSWLKYFSINYYIYHLLMGSQYSSSDTYPCSHGKCLVAEYPLIEQKGLHFQGKLTAASALFIMLIGYRLVAYLALMKIGNTKKMR* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1187 627 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 30 619 - -
Vra2g1187 627 Gene3D - 34 278 IPR027417 -
Vra2g1187 627 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 30 619 - -
Vra2g1187 627 ProSitePatterns ABC transporters family signature. 184 198 IPR017871 GO:0005524
Vra2g1187 627 Pfam ABC-2 type transporter 241 312 IPR043926 GO:0140359
Vra2g1187 627 SMART AAA_5 71 261 IPR003593 -
Vra2g1187 627 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 276 IPR027417 -
Vra2g1187 627 Pfam ABC transporter 62 212 IPR003439 GO:0005524
Vra2g1187 627 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 35 284 IPR003439 GO:0005524
Vra2g1187 627 Pfam ABC-2 type transporter 359 564 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1187 Vra-Chr2 15968021 15971087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1187 69 273 Calmodulin-binding Proteins AT2G36910 24.645 5.93e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1187 K05681 - gmx:100812397 956.822