Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1160 ATGTCTTCCATTAACAACTCTTTCTTTGTTATGGTTTCTATTCTTTCTCTTTTGGCTTTTCCAAGCAATGCACAACTTTCTCCCTTCTTTTATGCCAGAACTTGCCCCAACCTTCAAACCATAGTGCACAGTACAATGAAACAAGCCATTGCCACAGAACCTAGACTTGGTGCTTCTATTCTTCGCTTGTTTTTTCATGATTGCTTCGTACAAGGCTGTGATGCATCAATTCTTTTGGACGACACAGCAACATTCACAGGAGAGAAAAATGCATTACCTAACATAAATTCAGTGAGGGGCTTCGAAGTTATTGATAACATAAAAAACAACGTTGAAGCTGCTTGCAATGCCACTGTGTCTTGTGCTGATATTCTTGCACTTGCCGCAAGAGATGGAGTAGTGCTACTAGGAGGACCCTCATGGATAGTGCCTCTAGGAAGAAGAGATTCAAGAACAGCAAATCAGAGTGCAGCCAACAGCGAAATCCCTTCACCTTTCTCAAACCTCCCCATCCTGATATCCGCGTTTGCAGCCAAAGGTCTGACACCAAGGGACCTAACAGCGCTTTCAGGAGCCCACACAATTGGCAAAGCACAGTGCCAATTCTTCAGGACTCGCATATACAACGAAACCAACATTGATCCTAACTTTGCCGCCACAAGAAGGGCCAATTGTCCTATTACTGGAGGGGACTCCAACCTGGCCCCTCTTGACCCCGTCACACCAACCGGTTTTGACAACGAGTACTACGCTAACCTTCTGAACCAACGTGGCCTTCTCCACTCTGACCAAGAGCTTTTCAATGGTGGGTCTCAAGATGTCCTTGTGAGTACCTATGCTGAGGGTACTATTACCTTTTTCACGGACTTTGCTATTGCCATGGTGAAGATGGGCAACATTAGTCCTCTCACTGGGACCAATGGGGAGATCAGAAGGAACTGCAGGGTGGTGAACTGA 957 0.4587 MSSINNSFFVMVSILSLLAFPSNAQLSPFFYARTCPNLQTIVHSTMKQAIATEPRLGASILRLFFHDCFVQGCDASILLDDTATFTGEKNALPNINSVRGFEVIDNIKNNVEAACNATVSCADILALAARDGVVLLGGPSWIVPLGRRDSRTANQSAANSEIPSPFSNLPILISAFAAKGLTPRDLTALSGAHTIGKAQCQFFRTRIYNETNIDPNFAATRRANCPITGGDSNLAPLDPVTPTGFDNEYYANLLNQRGLLHSDQELFNGGSQDVLVSTYAEGTITFFTDFAIAMVKMGNISPLTGTNGEIRRNCRVVN* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1160 318 Pfam Peroxidase 43 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra2g1160 318 CDD secretory_peroxidase 25 317 IPR033905 GO:0004601|GO:0042744
Vra2g1160 318 Gene3D - 30 315 - -
Vra2g1160 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Vra2g1160 318 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Vra2g1160 318 Gene3D Peroxidase, domain 2 163 297 - -
Vra2g1160 318 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g1160 318 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g1160 318 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g1160 318 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g1160 318 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g1160 318 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g1160 318 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g1160 318 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g1160 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g1160 318 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra2g1160 318 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra2g1160 318 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra2g1160 318 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra2g1160 318 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra2g1160 318 PANTHER PEROXIDASE 72-RELATED 22 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g1160 318 SUPERFAMILY Heme-dependent peroxidases 25 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra2g1160 318 PANTHER PEROXIDASE 22 318 - -
Vra2g1160 318 ProSiteProfiles Plant heme peroxidase family profile. 25 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1160 Vra-Chr2 15315348 15317308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1160 24 318 Peroxidase AT5G05340 62.626 1.21e-135 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1160 K00430 - gmx:100810392 497.664