Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1153 ATGGACTGCCTTGTGGGTTTTGCATCTTCTGTTTCAAGAGATTTAGTGTGTGGGGCATTAAATCAATTGCGTTATCTTCGCTCTTTTAACAAGTTTGTCAAAAAGCTTGAGCAAGAAGAGGGCGATTTGATTTTAACAAGAGATGGTGTCCAAAAATCTGTTGAACAAGTCAAGAGAAAAACTAGAGAGACTAGTGAACTTGTTAACAAGTGGCTGGAAGATGCTATCAGTGACATAGGTAAAGTGAATCAGTTGCTAGAAGAGGCAAGAACAAAGAAAATGTGTTGCTTTGGGTATTGTCCAAATTGGATTTGGCGATACCGTATAGGAAAAAAGATAGCAAATAAAGTTTTTGACCTTGAAAAGTTCATTGATGAGGGTAAAAAATATGTGTCATTTGACAGCATCGTTACGCTACCTTCAGGCACCCTTCACATTCTCTCAGAAAAATGCATGAATTTTGAGAGTAGACAATCTGTATATGAGCAACTACTGGATGCAGTGAAAAATAATGATGTTTCCATGATTGGGTTGTATGGGATGGGAGGTTGTGGTAAAACCACATTAGCAATGGAGGTTATGAAATTAGTAGAAGTAGAGCATCTTTTTGACAAAGTTCTTTTTGTACCTGTTTCTAGTACAGTGGATGTTCGGAAGATTCAAGAAAAAATAGCAAGTTCATTGCAAGTTGAATTTCCAGAAACCGAAGAAATGCAGAGAGCCCAAAGATTGTGCTTGAGATTAATTCAAGAGAAAAATATTTTTATAATTCTAGATGATGTGTGGGAAAAGCTTGACTTTGGTCGTATTGGGATTCCTTCCTCTGATCACCATAAAGGCTGCAAGATTCTCATTACGACGAGATCAGAAGAAGTTTGTACCTCAATGGATTGTCAAAGAAAAATTTACCTACCAATTTTAACGGATGAAGAAGCATGGACTCTTTTCGAAAATAAAGCATTTATAACAAAAGGCAGCCCTGATACCTGGAAGGATCTGGGAAGATTAATTTCCAATGAATGTAAAGGATTGCCTGTTGCCATTGCAGCTGTTGCTTGTAGTTTAAAGGGAAAAGCTGAGACTGTATGGAGGGTTGCATTTAATAAATTGAGACATTCTAAGCCAATAAATATTGAAAGAGGTTTGACTGATCCCTACAAGTGCTTGCAGTTGAGCTATGATAATTTGGATACTAAAGAAGCTAAATCACTTTTCCTGTTGTGCTCTGTGTTTCCTGAAGATTTTGAAATTCAAGTTGAACTTTTAACAAGATGTGCAATAGGATTAGGTGTAGTTGGAGAAGTTGACTCATATGAAGAGGCAAGGAGTGAAGTGATTGCAGCTAAAATTAAGCTTGTTAGTTGTTGTTTATTGTTGGATGCAGACGATGAATGTGTCAAAATGCATGACTTAGTTCGTGATGTGGCCCACATAATAGCAAAAACTGAGAATAAGATGATAAAGTGTGAAGTGGAAAGACATGTTACAGTGGAACAAAATTCTGTGAGATATCTATGGTGTTCCAAATTTCCAAATGTTTTGGATTGCTCCAATCTTGAGTTTTTATGCTTAGAGGCCAATATGAAAGGATTTGATGGAATTTTCAAAAGAATGGGAATGCTCAAAGTTTTGATTCTTGCCAACGATGAGGATGGAAAAACACAAATGTCAACAATATCTTTCAAAACATTAACAAATCTTCGTTATCTATTCATTGAGAATTATGAATTGAGTGACTTCTCGTTTTTAGGTGGAATGAAGAATCTTCAAAGTCTCAAGTTATTTGATTGTTTACTGCCTTCATTTCCTGAATTACAAACCGATGTTGCAATTACACTAAAATTGTTAGAGTTGAATAAATGTGACATTAAAGTGAAGAATTTTGAAGGGATGAAGAGAATCCCGCTTTTGCAAGAGTTGTACATTATTGATATTGAAGGAGAATGGTATGCTAACAGTGAAGACAATATTGAATTCTTTAACACGTTTAGCATTCCCGAAACACTACAAAGGTATGGAATTGTATTAGGGTCTCGTTACTTTTATCATCATAGTGATGGAGATATTTACATTCATGGCAGAACTTTATTACTTAACCATTTTGACATATCAAATGAGGTAATAAAGGGTTTGGCAAAAAAAGCAAAGGATCTATTTGTAGGAAATATTCATGGGGGTGCAAAAAATATCACCCCTGATATATTTCAAATTGAAGGAGGAGGTTTGAATGAGTTGAAGAAGTTGGAGATAATTGATTCTGAAGAGTTAGAATGTTTGATTGACACTAGTAGTCACTCGAGTGAGGTGGTAACTCTCTTCTCCAAGTTGCATACGTTGAAAATGGTGCGCATGGAAAATCTAAAAGCTATATGGCATTGTTTTCTTCCTGCCAATGGACCTTTTGAGAACTTAGAGAAGTTGGATTTAAGTGATTGTCCACGGTTGACATCTCTCTTCACATATGTGGTTGCTCTAAATTTAGTTAAATTGAAAATATTAAAACTATCAAGATGTCATGAACTGAAGCATATATTAACAGATGATGAGAAAACAGAGAAAAGTCATAATGAATTCACTGGTGGGCATCCTGTACAAATCTTCCAAAATCTTCAGGATGTAAAGATAGATAGTTGTCCAGAATTAAAATATATATTCTCGGCCAACATTGTTGGAGGGTTAGGTCAATTGAAAGTGCTCAAGATAGAAAGATGCGACATGCTAGATCAAATAATTGGGGATAGAAAAGAAGAACTTGATGAAATTGTTGAGGAAGGAACTCTATCTAGCCTTTCAAGCCTTACGATAACGTGTTGTGGGAAGTTAGGCTCAATTTTTACATCATCTATAGCTAAGACCTTGACTTCTTTGGAAGAATTGTTCATAGATGACTGTAAAAGTTTGAAGGATATAGTAAGTCATGAAAGGGATAATAAAAATCAGGAGGAAAGCATTGTTGAGGATGAGCATGATTGTCAGTGTGATATTTCAATCTTCCAAAGTTTGGAAAGGCTTGATATCCGTAATTGTGACTTATTGAAAAAGCTACGTATATTCCCTGTTTCTTTTGTTGGAGGCATGAAGAAATTGAATGATATAACAAATAAAGAGGCTGCTGATTTGAAAGATTTCTCTAGTCGAAATAATACTCAAAATGAGGAGATTCTAAACCATTTCCTCATTCTACAAACTCTAGTCATATGGAGATCTGGACTAGAATGTATTTTTTTCCTTAATGGATATGGAATGATTGACCAACAAGTGAGTTTAAGGTTAGAGAAGTTGGACTTGTATAATCTACCTCAAATGACTTATATTTGGGTGGGTCCCAACAATTCACTTACTCTCCAACATCTTATCACATTAGAAATAACGGATTGTGGAAAGTTGGAAGTAATATTTCCAAATTCTGTTATAAGATGCTTACCAGAGTTGGCGTGGCTAACCATATCAAAATGCATGGAATTGAAGCAGATCATTGAAGAAGACGAATCCAATATAGATGGAGGCTCTGAAGTAGAGGAGATTATTGAATGTAATAAAGAACCTTCAAACAATTATTTTGACTTCCCAAATCTTGAAAGACTAGTAATAGTTGAATGTGCCAAATTGGAAGTAGTCTTTTCAAAGTCTGTTTTAAGATGCTTACCAAAGTTGAATGTTCTTGTGATAAAAAAATGCAATGAATTAAGACAAATCATTGAAGGGGATAAAAATTTGTCTAATATTCTTTCTCCTCAACCATGTTTCCCAAAACTAGAAGCATTGCAGGTTGATCATTGCCAAAAGTTGAAAAGAGTTTTCTCTGGATATGCTTCTAATGACCTTCCCAATCTTCATCTTCTGGCCATAAATGGAGCCAATGAACTAGAAGAGCTTGTTGGATGTAAACAAGAAAAGATTAAAGTTGAGCTTCCAAGACTTAAACTTTTAATATTTATGCATATGGAAAACTTCAGTCAAGAGATTGACTTGCATAATTTAAAAAATTGCTTTGTCTACAAATGTCCAAAATTATCTTTGACTTCAACAACTACATTTTGGAAGGTCCTTGAACATTTTCCTTCCCAAGGAAAGTTGGTGTATGAGGAATCAAACAGTGAAGGAGGTTTTCCATACCAATATGCACTTGAAGAAGCAATAGTACAGGGCTCCTTTCAAACTTTAGAGTCACTCAATCGTATTTTTTCAATTTGTAATACACAAGAGATTGAGGACTTAAGAAATGAGAGCGTTAAATCTTCATCCACTGGAGTTGAAGACATTGGCATTGAAGATGCTGTTGCAACTCACACTGATTCTGGTGGCGAGGACATACTTGCACTAGATTCCAAGGTAGTTGAACAAGATGATAAGATGAATGAAAGCAAGCCAGGAATAATGGCAAGCCAAGGAATCCAAGTAGAAGAAGGGTTGAACCTTTTGCATAAACAAGAGGGAATAGATGTTGTTCCTAACAACAACATTGATATTTCTTCAGCTTCTGCAGATATCCGTACAAGATTGGGAGCATATAAACATTTTGTTGATCTGGATGATGAACAAATTTCTCTTCTGGTGGAGGCAATAACAACATATCCTCATCTCTGGAATGCTTCCAAAAAGTTTAGTGAGCGCTTTCAAGCTTGGAGGTTGAAAATTTTGGAAGATATGTTATCGTTCCTCCAGGAAAGTGGCGATAGTATTCCTGAAAGAGAAAAAGAGTTCCATAAACTATGTGAAGAAGCTATTGAAATTGGATTTGATAGTTCATGGATAGAGGAAATGCGTCAACGTGTTGTAGCGAGGGATCTTAAGCCAGGAGAGGACATTGCACGGAGACAAATAGATGAGAATTCTAAGAGTTTGTTACACAGGTGTAGTAGTGGGGACATGGTACCAGATTCCCAGTCTGTTGAACGAGGTGATGGATCTAAGATTAGCTTGGAAGAAGGTTCTAAGTTGGTTGATAAAGAAAGTGAAATAAGCATTGTTTCTAATGACCGTATTGTAGCTCCGAGAAATGAAGAACTAGAGATGGAATTTGTTGCAAAAGTTTCCACTTCAGAAATACCAAGTATCGCAGCAACATTAACAAACTCACAACCAGTGGAAAGGCCAACTCCAAGTTGTTTGAATATGCCTCTATGTGAAACACCCGCAAATGCATTGGTCGACAAACAACGGATTATTGAACCATGTTTGATGAACCAACAAAAGCCATTTGGAAATATTAGTGAAATTACGAGCAGCCAAACTGAGGTAGGCACTGCTAAAGAAATTGCTCATCCTAAAATTATTCAAGGCTTTGGGAGCAATGATGTCATAAGCTTATTTGCATCAGAAAAAGAGAGTGAAGATAGCCTAGTGGGAAAGACCCTCACTGAGCTAGAAAAGTTTTTGAAGATGTCTCTGAAGGACGTAGTTAGCTCTGAAACTGACACTCTTCGGTCTACTCTTAATTTGTTATCCAACATTCCTTTCAAAGATGTGACTCTATCAGATGGACTCAAACATATTATAGAGACTATGCGCCAACACTTCCCAACCATTCTACGCTCCTTTAAGCAAGGCTTTGCTACCATTGACAAGTTGGGAAAGCTTGAAGCTTGTCAGAATGAGGTGGCCACTACTCTTGTTTCCAAAATTTCTGAGGCAGATAATTTCTACAATGAAGCTCAAATGAAGGAAGAAGTTTTGAAGGAACAAATAAAAGTTTGTGAGGCTGCCTTATCATCTTTCGAGAGGGAAAAGAATAAATGCATTGCGGAAACTATAGGGTACAAAAAGGAGCTTGATAATGTGATGAAGGACAGATCTCAAATTTTGGAAGATAAAAGAAAAGTTGAGCAAGAATTGTTTGAGGTGGCTTATAAATGGTCAGTTCTATGTAGTCAATATGAGCTCAATCGCATGGTTGCTACAAATATCCCGTGA 5913 0.3628 MDCLVGFASSVSRDLVCGALNQLRYLRSFNKFVKKLEQEEGDLILTRDGVQKSVEQVKRKTRETSELVNKWLEDAISDIGKVNQLLEEARTKKMCCFGYCPNWIWRYRIGKKIANKVFDLEKFIDEGKKYVSFDSIVTLPSGTLHILSEKCMNFESRQSVYEQLLDAVKNNDVSMIGLYGMGGCGKTTLAMEVMKLVEVEHLFDKVLFVPVSSTVDVRKIQEKIASSLQVEFPETEEMQRAQRLCLRLIQEKNIFIILDDVWEKLDFGRIGIPSSDHHKGCKILITTRSEEVCTSMDCQRKIYLPILTDEEAWTLFENKAFITKGSPDTWKDLGRLISNECKGLPVAIAAVACSLKGKAETVWRVAFNKLRHSKPINIERGLTDPYKCLQLSYDNLDTKEAKSLFLLCSVFPEDFEIQVELLTRCAIGLGVVGEVDSYEEARSEVIAAKIKLVSCCLLLDADDECVKMHDLVRDVAHIIAKTENKMIKCEVERHVTVEQNSVRYLWCSKFPNVLDCSNLEFLCLEANMKGFDGIFKRMGMLKVLILANDEDGKTQMSTISFKTLTNLRYLFIENYELSDFSFLGGMKNLQSLKLFDCLLPSFPELQTDVAITLKLLELNKCDIKVKNFEGMKRIPLLQELYIIDIEGEWYANSEDNIEFFNTFSIPETLQRYGIVLGSRYFYHHSDGDIYIHGRTLLLNHFDISNEVIKGLAKKAKDLFVGNIHGGAKNITPDIFQIEGGGLNELKKLEIIDSEELECLIDTSSHSSEVVTLFSKLHTLKMVRMENLKAIWHCFLPANGPFENLEKLDLSDCPRLTSLFTYVVALNLVKLKILKLSRCHELKHILTDDEKTEKSHNEFTGGHPVQIFQNLQDVKIDSCPELKYIFSANIVGGLGQLKVLKIERCDMLDQIIGDRKEELDEIVEEGTLSSLSSLTITCCGKLGSIFTSSIAKTLTSLEELFIDDCKSLKDIVSHERDNKNQEESIVEDEHDCQCDISIFQSLERLDIRNCDLLKKLRIFPVSFVGGMKKLNDITNKEAADLKDFSSRNNTQNEEILNHFLILQTLVIWRSGLECIFFLNGYGMIDQQVSLRLEKLDLYNLPQMTYIWVGPNNSLTLQHLITLEITDCGKLEVIFPNSVIRCLPELAWLTISKCMELKQIIEEDESNIDGGSEVEEIIECNKEPSNNYFDFPNLERLVIVECAKLEVVFSKSVLRCLPKLNVLVIKKCNELRQIIEGDKNLSNILSPQPCFPKLEALQVDHCQKLKRVFSGYASNDLPNLHLLAINGANELEELVGCKQEKIKVELPRLKLLIFMHMENFSQEIDLHNLKNCFVYKCPKLSLTSTTTFWKVLEHFPSQGKLVYEESNSEGGFPYQYALEEAIVQGSFQTLESLNRIFSICNTQEIEDLRNESVKSSSTGVEDIGIEDAVATHTDSGGEDILALDSKVVEQDDKMNESKPGIMASQGIQVEEGLNLLHKQEGIDVVPNNNIDISSASADIRTRLGAYKHFVDLDDEQISLLVEAITTYPHLWNASKKFSERFQAWRLKILEDMLSFLQESGDSIPEREKEFHKLCEEAIEIGFDSSWIEEMRQRVVARDLKPGEDIARRQIDENSKSLLHRCSSGDMVPDSQSVERGDGSKISLEEGSKLVDKESEISIVSNDRIVAPRNEELEMEFVAKVSTSEIPSIAATLTNSQPVERPTPSCLNMPLCETPANALVDKQRIIEPCLMNQQKPFGNISEITSSQTEVGTAKEIAHPKIIQGFGSNDVISLFASEKESEDSLVGKTLTELEKFLKMSLKDVVSSETDTLRSTLNLLSNIPFKDVTLSDGLKHIIETMRQHFPTILRSFKQGFATIDKLGKLEACQNEVATTLVSKISEADNFYNEAQMKEEVLKEQIKVCEAALSSFEREKNKCIAETIGYKKELDNVMKDRSQILEDKRKVEQELFEVAYKWSVLCSQYELNRMVATNIP* 1971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1153 1970 Gene3D - 307 391 IPR042197 -
Vra2g1153 1970 Gene3D - 144 303 IPR027417 -
Vra2g1153 1970 Gene3D Ribonuclease Inhibitor 994 1292 IPR032675 -
Vra2g1153 1970 Gene3D Ribonuclease Inhibitor 695 857 IPR032675 -
Vra2g1153 1970 Gene3D Ribonuclease Inhibitor 858 989 IPR032675 -
Vra2g1153 1970 Coils Coil 1882 1909 - -
Vra2g1153 1970 Pfam NB-ARC domain 164 395 IPR002182 GO:0043531
Vra2g1153 1970 Coils Coil 72 92 - -
Vra2g1153 1970 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 725 855 - -
Vra2g1153 1970 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 927 1164 - -
Vra2g1153 1970 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 21 621 - -
Vra2g1153 1970 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 865 914 - -
Vra2g1153 1970 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 1180 1282 - -
Vra2g1153 1970 Gene3D - 392 475 IPR036388 -
Vra2g1153 1970 MobiDBLite consensus disorder prediction 1617 1637 - -
Vra2g1153 1970 PRINTS Disease resistance protein signature 175 190 - -
Vra2g1153 1970 PRINTS Disease resistance protein signature 248 262 - -
Vra2g1153 1970 PRINTS Disease resistance protein signature 341 355 - -
Vra2g1153 1970 PRINTS Disease resistance protein signature 825 841 - -
Vra2g1153 1970 PANTHER - 725 855 - -
Vra2g1153 1970 PANTHER - 21 621 - -
Vra2g1153 1970 PANTHER - 1180 1282 - -
Vra2g1153 1970 PANTHER - 927 1164 - -
Vra2g1153 1970 PANTHER - 865 914 - -
Vra2g1153 1970 CDD AAA 157 287 - -
Vra2g1153 1970 Coils Coil 1924 1944 - -
Vra2g1153 1970 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 408 IPR027417 -
Vra2g1153 1970 SUPERFAMILY RNI-like 793 1310 - -
Vra2g1153 1970 SUPERFAMILY L domain-like 464 970 - -
Vra2g1153 1970 Gene3D Ribonuclease Inhibitor 476 657 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1153 Vra-Chr2 15093018 15101452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1153 157 646 WRKY Transcription Factor Family AT5G45050 23.872 3.63e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1153 - - vra:106752470 3903.21