Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1149 ATGCCAACTTCATCCGCCATTCCTGCACTGCATGGAAAGGTTTCTTCTACTGTAGTTGCTGGGGGGATGATTACTGCTGGGTCAAGAGATGGTGTTCAGTCACAAATTTGGCTACAGGACGAAAGAGAGCTTAAAAGACAAAGGCGGAAGCAGTCTAACAGAGAATCCGCATGTAGATCCAGGTTACGGAAGCAGGCAGAATGCGATGAACTAGCTCAGCGTGCTGACGTTTTGAATGAAGAAAATGCCACTCTCCAAGCAGAAGTAAGCAGGATCAGGAGTGAGTACGAGCAACTACTTTCTGAGAATGCTTCCCTCAAGTTTGTTTCCAATGAGTGGGTGTTAGTTCTATTGTCAAGCAAGAGATGA 369 0.4607 MPTSSAIPALHGKVSSTVVAGGMITAGSRDGVQSQIWLQDERELKRQRRKQSNRESACRSRLRKQAECDELAQRADVLNEENATLQAEVSRIRSEYEQLLSENASLKFVSNEWVLVLLSSKR* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1149 122 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 48 63 IPR004827 GO:0003700|GO:0006355
Vra2g1149 122 Coils Coil 61 102 - -
Vra2g1149 122 CDD bZIP_plant_GBF1 46 96 IPR045314 GO:0003700|GO:0006355
Vra2g1149 122 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 2 107 - -
Vra2g1149 122 Gene3D - 44 98 - -
Vra2g1149 122 PANTHER G-BOX-BINDING FACTOR 3-RELATED 2 107 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vra2g1149 122 SUPERFAMILY Leucine zipper domain 44 100 IPR046347 GO:0003700|GO:0006355
Vra2g1149 122 SMART brlzneu 41 105 IPR004827 GO:0003700|GO:0006355
Vra2g1149 122 Pfam bZIP transcription factor 41 103 IPR004827 GO:0003700|GO:0006355
Vra2g1149 122 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 43 106 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1149 Vra-Chr2 14961045 14964275 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1149 2 107 bZIP Transcription Factor Family AT2G35530 68.868 2.31e-43 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vra2g1149 bZIP_1 2.6e-20 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1149 K09060 - vra:106755921 207.608