Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1122 ATGGCCACATTCATCTTTAGATCTAACAAAGCAGTGCATGCTTTGGTTGGCTGCCTTTGTCTTCTGCTGATGGTTCAAAAGGGTGCTTCCTATGATTTTGTAGTTGGTGGCCAAAAGGGTTGGAGTGTTCCCAATGATCCCAGTTTCAATCCTTTCAATCAATGGGCAGAAAAGAACCGTTTTCAAGTTGGAGACTCCCTTGTGTTCAACTACCAATCTGGGCAAGACTCAGTGCTGTATGTAAAGAGTGAAGACTATGCGAGCTGCAACACCGATTCACCTTATTCAAAATTTTCTGATGGCCACACAGTCTTCAAGCTAGACAAATCAGGGCCTCACTTTTTCATAAGTGGAAGCAAAGACAAGTGCTTGAAAAATGAGAAGTTAACAGTGATTGTGCTTGCTGAAAGGAACAAAAACAACAACCAAAGCACCAATGCTTCTCCACCTTCACCACAATCATCATCTTCATCACCAGCACCTACTACTGGGCAAGAGGGTCAATCTCCATCTTCAGACACAAACCAAACACCAAGCCCTGTTAGTGAACCTCCACCTCCTAATGCTGCTGCTTCAGCCTTTGTCTCTCTTGCTGGCTCTGTTGGAGCATTCATGGTTTCAGTCATCATGCTTTTATCTTTCTAA 645 0.4372 MATFIFRSNKAVHALVGCLCLLLMVQKGASYDFVVGGQKGWSVPNDPSFNPFNQWAEKNRFQVGDSLVFNYQSGQDSVLYVKSEDYASCNTDSPYSKFSDGHTVFKLDKSGPHFFISGSKDKCLKNEKLTVIVLAERNKNNNQSTNASPPSPQSSSSSPAPTTGQEGQSPSSDTNQTPSPVSEPPPPNAAASAFVSLAGSVGAFMVSVIMLLSF* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1122 214 MobiDBLite consensus disorder prediction 137 178 - -
Vra2g1122 214 Pfam Plastocyanin-like domain 41 125 IPR003245 GO:0009055
Vra2g1122 214 Gene3D - 31 147 IPR008972 -
Vra2g1122 214 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 11 211 - -
Vra2g1122 214 SUPERFAMILY Cupredoxins 30 134 IPR008972 -
Vra2g1122 214 ProSiteProfiles Phytocyanin domain profile. 31 135 IPR003245 GO:0009055
Vra2g1122 214 PANTHER BLUE COPPER PROTEIN 11 211 IPR039391 GO:0009055
Vra2g1122 214 MobiDBLite consensus disorder prediction 137 191 - -
Vra2g1122 214 CDD OsENODL1_like 31 134 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1122 Vra-Chr2 14247944 14249091 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1122 17 194 Phytocyanin Superfamily AT3G20570 47.222 5.22e-50 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1122 - - gmx:100781182 318.931