Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1102 ATGATGTTGAAATCCTTATGGAAAAGCCTGATAAGCCTTCAAGATAAGTGTGTGAAGAAGCAAAAGAGTGAAGTTGATGGAAGTGTGTCAGTGCATGGTGAAGAAGACTTGGTCGTTTTGCCTGTGCAGTGTTGCAACTGTTGCATAGAAGAAACCAAACAATGCAATTGTGACCATACTCATGCAGCAGAAGACGCAAATGTCCACGCTCAGCGTCATGCTAACTCCAACAGTTCCTTTACTCATGCTGTCATCAACATGGTGGGGATGCTCATAGGTTTGGGGCAACTATCAACTCCATATGCAGTGGTAAGTGGAGGGTGGGTGTCTGCATTCTTGCTTGTAGGACTAGGTGTAATGTGTGCTTACAGTTCTCACATACTTGGAACATGCCTCAGAAAGAATCCAAAGTTAAGAAGCTTTGTGGATATTGTGAAACATGCATTTGAATCAAAAGGAAGGTTGGTGGCTGCAACAATCATCTACATGGAAATCTTCATGTCCCTTGTTTCCTACACCATCTCATTACATGATAATTTGAACAAAGTCTTTCTGGGGACAAATCTCAAGCACCACTTCCCCAAATTCTCTTCATCTCAGTTCCTAACAGTGGTGGCAGTTCTCAGAGACCTCTCTTCCATATCTTTCCTTTCAACACTTGGTATTCTCATGTCTCTCCTCATTTTTCTCTGTGTAGCTGCCACTGCACTTTTAGGACATGTCCGAAACAATCATGCCATACCTGTCCTCCAACTCCATAATATTCCATCAGTATCTGGCCTTTACGTCTTTGGCTATGGAGGACACATTGTTTTCCCCGAATTATACACATCCATGAAAGACCCTTCAAAATTTACCAAGGTTTCTATTATGAGCTTCGCAGTGGTTACGNCAATTTACACGACACTGGGGTTCATGGGTGCGAGGATGTTTGGTAAGGATGTAAAGTCTCAAATAACTCTGAGCATGCCAGCAGAGAGCATTGTGACAAAGGTTGCTCTGTGGGCAACCGTGGTGGCACCAATGACCAAATACGCGCTTGAATTCACACCATTGGCAATTCAACTAGAACATGCTCTTCCAAGCACCATGAGTGNCAGAAGCAAGATGATTATTAGGGGTTCCGTGGGTTCANTTTCACTTTTGGTCATACTAACCCTTGCTCTGTCGGTTCCATATTTTGAACATGTACTAAGTNTCACTGGTTCCCTTGTCAGTGTTGCCGTTTGTTTGATTCTGCCATGTTCTTTCTACTTGAAGACATGTTGGGGTCAAATATCAAACCTTGTCTTGCTCCTTAACCTCTTTCTCATCACATTTGGCTTTCTTCTTGCTCTCATGGACACCATTTCCTCCTCAAAGTTGCTACTCAAAAGTTTTCAATTGCATCACTCAAGTTAA 1401 0.4268 MMLKSLWKSLISLQDKCVKKQKSEVDGSVSVHGEEDLVVLPVQCCNCCIEETKQCNCDHTHAAEDANVHAQRHANSNSSFTHAVINMVGMLIGLGQLSTPYAVVSGGWVSAFLLVGLGVMCAYSSHILGTCLRKNPKLRSFVDIVKHAFESKGRLVAATIIYMEIFMSLVSYTISLHDNLNKVFLGTNLKHHFPKFSSSQFLTVVAVLRDLSSISFLSTLGILMSLLIFLCVAATALLGHVRNNHAIPVLQLHNIPSVSGLYVFGYGGHIVFPELYTSMKDPSKFTKVSIMSFAVVTXIYTTLGFMGARMFGKDVKSQITLSMPAESIVTKVALWATVVAPMTKYALEFTPLAIQLEHALPSTMSXRSKMIIRGSVGSXSLLVILTLALSVPYFEHVLSXTGSLVSVAVCLILPCSFYLKTCWGQISNLVLLLNLFLITFGFLLALMDTISSSKLLLKSFQLHHSS* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1102 466 PANTHER AMINO ACID TRANSPORTER AVT1H 28 462 - -
Vra2g1102 466 Pfam Transmembrane amino acid transporter protein 77 449 IPR013057 -
Vra2g1102 466 PANTHER OS05G0424000 PROTEIN-RELATED 28 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1102 Vra-Chr2 13414267 13416783 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1102 45 464 Amino Acid or Auxin Permease AAAP Family AT5G16740 57.110 3.11e-161 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1102 - - gmx:100790897 686.411