Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1089 ATGGACTTGAATGAGTTTTCAAGTGTCGGTGTGACTAGTTCGGCAGGAATTCCTTGCACATCATCTTATAATCCTATTTCAGCAATACCCAACAGGTTGCTTGGATCCTTAGAACAAAACATAGAACACTCTCCTAATTCGGCCCTTTCTACCCATTTTGATTCTGATACCCTTTCTTCTGCGCTAAGTGACGGCCAAGAACAGCACACCGCTGGGGAAATTCACTCTGGTGTAAACCCTTTGCAGGAAACCAATCATTATTTGTATAGGCCAGTCTCACCTGTGGACCATCTCCAAGACGGTAAGCATCTATCTACTAGATGCTTTTTTCCACTGGATATAGGTTATGATCATGAAACAAGGTATGCATTGCTGGAACTAGAAAGTGCTTTGATGGCACCTGATGGTGATGATCAAGTCACCACATCAAGCACTTCTTTGGGTGTTAGCAGAAGGTCTACAACATCTGCCCAGAGAAATAGGTCCTGGAGCCATGAGGGGCAGCCGAGTGATGTTGCACGAGTAGGTAAGCGTCACAAATCAACTGAGGAAGTATCACTACAAGGATTCCCATCAACCAATTTGAAAGAATTGCTGATTGTATCAGCCAAAGCCTTGTCTGAAAACAACATGAAAGATTTTGATCGACTGATAGAGAAGGCTAGAAGTGTTGTGTCTATAACTGGGGAGCCAATCCAGCGCCTTGGTGCTTATTTGGTGGAAGGACTTGTTGCTAGGAAGGGGGCATCAGGGAATAACATCTACCGTGCGCTCAGATGCAGAGAACCTGAAGGAAAAGACTTGCTCTCTTACATTCAGCTACTGTATGAAATATGTCCCTACTTAAAATTTGGTTACATGGCTGCCAATGGCGCCATTGCTGAAGCTTGTAGAGATGAGGACCAGATCCATATCATAGACTTTCAGATTGGTCAGGGAATTCAATGGATGACACTTCTTCAAGCTCTTGCTGCAAGACCTGGTGGAGCTCCTCATGTGCGGATATCAGGGATTGATGACCCCCTTTCTAAATATGTTCGTGGTGATGGATTAGAAGCCGTTGGAAAAAGGTTGGCTGAAATATCTCAGACATTTAACATCCCAGTAGAGTTCCACAGTGTGCCTGTTTTAGCTCCATATGTGACAAAAGACATGCTTGACATCAGGCCTGGTGAGGCTTTGGCTGTGAATTTCCCTTTGCAACTCCATCACACGGCTGATGAGAGTGTGGATATGAATAATCCAAGGGATGGACTTTTGAGATTGGTGAAATCACTTTCTCCCAAGGTAACTACGTTGATTGAGCAAGAGTCGAACACTAATACCACTCCTTTCTTCAACAGGTTTATAGAAACCTTGGATTACTACTTGGCAATTTTTGAGTCCATTGATGTGTCTCTTGCAAGAAAGAGCAAGGATCGAATTAATGTTGAACAACATTGTCTGGCACGGGATATTGTCAATATTGTTGCTTGTGAAGGGAAGGAAAGGGTAGAGAGACATGAACTATTAGGCAAGTGGAAGTCTAGGTTCACAATGGCTGGATTTTCTCAATATCCTTTAAGTTCATACGTTAATTCTGTCATAAGGAGCCTGCTTAGGTGCTATTCAGAACATTATAATCTTGTGGAGAAGGATGGGGCCATGTTGTTAGGATGGAAGGACAGAAATTTGATTTCAGCTTCAGCATGGCATTGA 1698 0.4329 MDLNEFSSVGVTSSAGIPCTSSYNPISAIPNRLLGSLEQNIEHSPNSALSTHFDSDTLSSALSDGQEQHTAGEIHSGVNPLQETNHYLYRPVSPVDHLQDGKHLSTRCFFPLDIGYDHETRYALLELESALMAPDGDDQVTTSSTSLGVSRRSTTSAQRNRSWSHEGQPSDVARVGKRHKSTEEVSLQGFPSTNLKELLIVSAKALSENNMKDFDRLIEKARSVVSITGEPIQRLGAYLVEGLVARKGASGNNIYRALRCREPEGKDLLSYIQLLYEICPYLKFGYMAANGAIAEACRDEDQIHIIDFQIGQGIQWMTLLQALAARPGGAPHVRISGIDDPLSKYVRGDGLEAVGKRLAEISQTFNIPVEFHSVPVLAPYVTKDMLDIRPGEALAVNFPLQLHHTADESVDMNNPRDGLLRLVKSLSPKVTTLIEQESNTNTTPFFNRFIETLDYYLAIFESIDVSLARKSKDRINVEQHCLARDIVNIVACEGKERVERHELLGKWKSRFTMAGFSQYPLSSYVNSVIRSLLRCYSEHYNLVEKDGAMLLGWKDRNLISASAWH* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1089 565 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 22 565 IPR005202 -
Vra2g1089 565 MobiDBLite consensus disorder prediction 46 79 - -
Vra2g1089 565 MobiDBLite consensus disorder prediction 136 167 - -
Vra2g1089 565 ProSiteProfiles GRAS family profile. 186 565 IPR005202 -
Vra2g1089 565 MobiDBLite consensus disorder prediction 135 178 - -
Vra2g1089 565 Pfam GRAS domain family 195 564 IPR005202 -
Vra2g1089 565 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 22 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1089 Vra-Chr2 12498129 12501676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1089 118 564 GRAS Transcription Factor Family AT5G48150 55.580 8.35e-175 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vra2g1089 GRAS 1.3e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1089 - - gmx:100775665 978.778