Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1083 ATGGGAATTAAAAAACATATGGTTAACGTAAAGGCTAGCTTAGGTGTTCTTGTGGTTCTTCTTCTTGTAGCAGCAGTCAGTCCTTTGGAGAAGAAGGAAACAGAAGATCATTTTGTTAGAAAGTTTCTTGATCCAGCATCTGGGTTGTTCGATGAACACACGGCAAAAGTCTTATGGAAATATTGCAGGGAAGGTTTATTTCATTTAGTGAAAGATGTTGAGAATCATGATTTGTGTCTTTCATGGGAATTATCTGGCAGCACCAATATAATCAGCTCAGAAATTCAACCATTAGCACGAGAAGAGACCAAAAAATTTATCAATGCTTACTGTTCTCAATTCAAGGACAACATTCTTCACTGTTTGAGAAAAGATAATCCCCCATTACCTGATTCAGGAAAAGAGGATGATTCCAATATTTGGCATGTCACTTATATGGGACCACTTTTTTCCAGATCCAGTGCTCCTACGAGAAATTTTGGTCGTATTTTGCTCCAGCACATATCACAACCACCTAGTCCAGGCCCTGCACCTAGTTTAGCACCATCTTCTGAACCCAGTCCAGCACCATCTTCTGAACCCAGTCCAGCACCATCATCTGAACCCAGTCCAGTACCATCACCTCATTCTCCAGTACATCATCTTCCTAGACCACTGCAACCTTCTGCACCAGCACCTTTTTTTCCAAAATTGACACCACCAGCAGCTTCAGATATTTCTGCTCCTCCATCTCCGGAAATTGACAAACAGGAAGATAGTGACAGTAATAAAAAAACAGTTGTTCTTTCAGTAGTTATAACTGCATTGTTGACATTTATAGCTGCAGCACTGCTCTTTTTATGCTGGAGGCGGCATCAGAGGACTGGCCATGTTAGACTAAATGATGATAGGCCTCTTCTCAGCTTGAGCATGAGTGACTACTCTGTTGGTCCTTCCAGTTTTTCTTTTGGGAATTCAATGAAAGGGGAGAAACCTGGGTTTCAGTCAGCTAGTAATAGTTTAGTAGACAATAAGTATACTGTGCAAGAAAGTCAATCAATAGGAGTTCATAATGCTGCTACAGGGTCACCATTTGAACTGAAACCTCCTCCCGGTAGGATGGGAATCATTCCTTCTGGAATGCCTCCCTTAAAGCCTCCACCAGGAAGCTTAAAGCCTCCACCAGGAAGGTTAAATCCTCCTCCAGGCAGATTAAACCCGCTTCCTCCTGAGCCACCTTCATTTAGGCCTTTGGATGCTGCAGCTCCTCCAGCATCTACCACTACTGTTGCTGCAGTTCCTCCTCCTGCCCCTCAAAAGCCTGCTAGCATTCCACCTACTCGACCACCTCAACCACCAATGGGTGCCAAACCTAGCCCACCTCCACCAGCACTAGCTGGTTCCAGACCAGGTCCTCCTCAACCACCTCCAGCACCAGCTGTTTCCAGACCTGGTCCTCCTCCTCCACCACCCCCGGCACCAGCTGGTATTAAACCTGGTCCTCCTCCACCACCACCCCTAGCACCAGGTGGTTCCAAACCTGGTCCTCGGCCACCACCACTACCTCCTGTTAATGGTGTAGCTCCTCCTCGACCTCCTCCATTTGGCTCAAAGGTGCCCCAGCCTTTGGCTAGTGGATCAAAAGCTACAGTTGCAAGTGAAGTTGATGCTCCCAAAGCCAAGCTAAAGCCCTTCTTCTGGGATAAGGTTCAAGCAAACCCAGATCAATCAATGGTTTGGAATCAAATCAAATCAGGATCATTCCAATTTAATGAGGAAATGATAGAGACGCTTTTTGGCTATAATGCTGTGGATAAGAACAACGGTCAAAGACAGAAAGAGTCTTCCTCTCAAGACCCTTCACCTCAGTTTGTCCAGATCATTGACAAAAAGAAAGCACAAAATTTATTGATTCTGTTGCGAGCATTGAATGTGACAATGGAAGAAGTTTGTGATGCGCTTTATGAGGGACATGAGCTACCCCCAGAGTTCCTTCAAACTTTGCTAAAGATGGCACCAACATCAGATGAAGAACTTAAGCTCAGACGTTTTGATGGTGATCTATCTCAACTTGGTCCTGCTGACAGTTTCCTCAAAACCCTAGTTGACATTCCATTTGCATTCAAAAGAATGGAAGCTCTGCTTTTCATGGGCTCATTTAAAGAGGAGCTTGGAACTACTATGGAGTCCTTTTACATTTTGGAGGTTGCTTGTAAGGAACTAAGGAGTAGCCGGCTATTTCTGAAGCTTCTTGAAGCTGTTCTCAAAACTGGCAATCGAATGAATGATGGAACTTTCCGTGGTGGTGCTCAAGCATTTAAACTTGATACACTTCTGAAATTGTCTGATGTAAAAGGAACAGATGGGAAGACTACACTCTTACACTTTGTTGTTCTAGAGATTATCCGTTCTGAGGGCATAAAAGCCGTCAGAAAATCCAAAGATAGCCAGAATTTGTCTATTATTAAATCAGATGACCTTCAGGATAGTATTCAAGAAACAGAAGATCACTACCATGAAATTGGCCTTCAGGTGGTTTCACACTTGAGCAGTGAACTTGAGAATGTGAAAAAAGCAGCAGTTATAGACGCAGACAGCTTAACAGGAACCACTGCCAAACTTGGCGAAGGTCTAGTAAACACACGAGACTTGATAAATAAAAACATGAAGAATGTGAAGGAAGACAGGGGGTTTTGTGAGACAGTGAAAAGTTTTGTGCAGAATGCTGAGGCTGATGTTAAGAAACTGCTGGAAGAGGAGAAGAAGATCATGGCTTTGGTGAAGAACACTGGTGATTACTTTCATGGGAATGCTGGGAAGAATGAAGGCTTAAGGCTGTTCATAGTAGTACGGGACTTCTTACTAATGCTGGATAAAATATGCAAGGAGTTGATAGACACACAGAAGAAGCAAGCAAAAACGGTAAAACAAGAGAATCCCAGGGGACAGTCGTCCTCCGAAACAAGGCCACCACCTGATCTTCGACAGCGGCTCTTCCCAGCAATTGCTGAAAGGAGGATGATTGACATTAGTTCAGATGATGAGAGTCCATAG 3033 0.4398 MGIKKHMVNVKASLGVLVVLLLVAAVSPLEKKETEDHFVRKFLDPASGLFDEHTAKVLWKYCREGLFHLVKDVENHDLCLSWELSGSTNIISSEIQPLAREETKKFINAYCSQFKDNILHCLRKDNPPLPDSGKEDDSNIWHVTYMGPLFSRSSAPTRNFGRILLQHISQPPSPGPAPSLAPSSEPSPAPSSEPSPAPSSEPSPVPSPHSPVHHLPRPLQPSAPAPFFPKLTPPAASDISAPPSPEIDKQEDSDSNKKTVVLSVVITALLTFIAAALLFLCWRRHQRTGHVRLNDDRPLLSLSMSDYSVGPSSFSFGNSMKGEKPGFQSASNSLVDNKYTVQESQSIGVHNAATGSPFELKPPPGRMGIIPSGMPPLKPPPGSLKPPPGRLNPPPGRLNPLPPEPPSFRPLDAAAPPASTTTVAAVPPPAPQKPASIPPTRPPQPPMGAKPSPPPPALAGSRPGPPQPPPAPAVSRPGPPPPPPPAPAGIKPGPPPPPPLAPGGSKPGPRPPPLPPVNGVAPPRPPPFGSKVPQPLASGSKATVASEVDAPKAKLKPFFWDKVQANPDQSMVWNQIKSGSFQFNEEMIETLFGYNAVDKNNGQRQKESSSQDPSPQFVQIIDKKKAQNLLILLRALNVTMEEVCDALYEGHELPPEFLQTLLKMAPTSDEELKLRRFDGDLSQLGPADSFLKTLVDIPFAFKRMEALLFMGSFKEELGTTMESFYILEVACKELRSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGIKAVRKSKDSQNLSIIKSDDLQDSIQETEDHYHEIGLQVVSHLSSELENVKKAAVIDADSLTGTTAKLGEGLVNTRDLINKNMKNVKEDRGFCETVKSFVQNAEADVKKLLEEEKKIMALVKNTGDYFHGNAGKNEGLRLFIVVRDFLLMLDKICKELIDTQKKQAKTVKQENPRGQSSSETRPPPDLRQRLFPAIAERRMIDISSDDESP* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1083 1010 MobiDBLite consensus disorder prediction 167 256 - -
Vra2g1083 1010 MobiDBLite consensus disorder prediction 965 991 - -
Vra2g1083 1010 Gene3D Formin, FH2 domain 550 982 IPR042201 -
Vra2g1083 1010 ProSiteProfiles Formin homology-2 (FH2) domain profile. 545 976 IPR015425 -
Vra2g1083 1010 MobiDBLite consensus disorder prediction 368 412 - -
Vra2g1083 1010 MobiDBLite consensus disorder prediction 970 984 - -
Vra2g1083 1010 SUPERFAMILY Formin homology 2 domain (FH2 domain) 615 978 - -
Vra2g1083 1010 SMART it6_source 545 965 IPR015425 -
Vra2g1083 1010 Coils Coil 899 919 - -
Vra2g1083 1010 MobiDBLite consensus disorder prediction 422 532 - -
Vra2g1083 1010 MobiDBLite consensus disorder prediction 348 544 - -
Vra2g1083 1010 PANTHER FORMIN-RELATED 1 1008 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Vra2g1083 1010 PANTHER FORMIN-LIKE PROTEIN 1 1008 - -
Vra2g1083 1010 Pfam Formin Homology 2 Domain 547 950 IPR015425 -
Vra2g1083 1010 MobiDBLite consensus disorder prediction 171 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1083 Vra-Chr2 12283508 12290858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1083 240 408 FH2 protein (formin) Gene Family AT5G54650 41.040 2.37e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1083 - - gmx:100793413 850.892