Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1073 ATGGAGGTGCAGCCTGTGAGAATTGAGGATATTCGTTATAGGCAACTAAAAAGGAAGACCATCACTCTTGTCAAGCAACCTTCTCATGTTCACAACTTGCTAGGATATTATTATGATATTATTCTTCCACAAAAAAAATTATATCCGGTCAAGGGTGAATCATACATTTCATACATATGTTCACGTTACTATCGAGCTCCACAACTAATATTTGGTGCAACAGAATACACAGCTTATATTGATATATGGTCAGCTGGTTGTGTTCTTGATGAACTTCTTCTAGGACAGGTTAAACATTCTGGCTATCTAGGTATTAATTCTTTAGTTGAACTGCTCCTATTATTGTTTGGTACCCCCACACGAGAGGAAATTCGTTGCCTGAACTCAGAATATACAGATTTTAGATTCCCTCAGATTAAAGCTCATCCTTGGCACAAGGTTTTCCATAAGCGAATGCCTCCGGAAGCAATTGATCTTGCATCAAGGCTTCTCCAATATTCACCTAGTCTCCGGTGCACTGCACGGGAAGCGTGTGCACATCCTTTCTTTGATGAGCTCCGCGAGCCAAATGCTCGTCTACCTAATGGCCGTCCATTGCCCCCGCTTTTCAACTTTAAACAGGAAATGGGTTCTAGCATGAGGAGAGAAATTTTCACTGAGAGTGTTTCTATGGGCCTCAAAAATTGGCAGAAAAGGGCTAAACAATCTCTGCAGAACAACTCAACTTCAAGAAAACACTCAGACTCTTTGCATTCCAAAGGAGGTGACAATTCAGCAAGAGGAACAATGCATAGTTTGAACAACCCAGATATTGTAGTGCTCACAAACAACCCTTCTCCCTCTAATGAGGGAGAGAGCATTGCTCCCACCAATAATGAGCAAGATGTATCAAGTCCTTCGACTTCAGAAATCACAGTTACTGAGGAAGAGAATTCCAAGATCATCACCAGAGGAACCTATGACGGTGAGATCTCATTTGGTAGCAGCTGGAAGAATGTAGGAAGTAGCAGAGGCATTGGAGAAATTGTCTCAATAACTGAAGAAGATGACGCTGAAAAATTACCTGAATTTATCCATAGAACATAA 1086 0.4116 MEVQPVRIEDIRYRQLKRKTITLVKQPSHVHNLLGYYYDIILPQKKLYPVKGESYISYICSRYYRAPQLIFGATEYTAYIDIWSAGCVLDELLLGQVKHSGYLGINSLVELLLLLFGTPTREEIRCLNSEYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAREACAHPFFDELREPNARLPNGRPLPPLFNFKQEMGSSMRREIFTESVSMGLKNWQKRAKQSLQNNSTSRKHSDSLHSKGGDNSARGTMHSLNNPDIVVLTNNPSPSNEGESIAPTNNEQDVSSPSTSEITVTEEENSKIITRGTYDGEISFGSSWKNVGSSRGIGEIVSITEEDDAEKLPEFIHRT* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1073 361 MobiDBLite consensus disorder prediction 254 310 - -
Vra2g1073 361 MobiDBLite consensus disorder prediction 231 310 - -
Vra2g1073 361 PANTHER SHAGGY-RELATED PROTEIN KINASE IOTA-RELATED 50 212 - -
Vra2g1073 361 Pfam Mlo family 201 253 IPR004326 GO:0006952|GO:0016021
Vra2g1073 361 SUPERFAMILY Protein kinase-like (PK-like) 53 216 IPR011009 -
Vra2g1073 361 Gene3D Transferase(Phosphotransferase) domain 1 43 224 - -
Vra2g1073 361 ProSiteProfiles Protein kinase domain profile. 1 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra2g1073 361 SMART serkin_6 13 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra2g1073 361 Pfam Protein kinase domain 52 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra2g1073 361 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 50 212 - -
Vra2g1073 361 MobiDBLite consensus disorder prediction 231 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1073 Vra-Chr2 11858079 11903100 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1073 58 205 MAP Kinase Gene Family AT3G59790 38.312 9.13e-23 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Vra2g1073 Pkinase 2.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1073 K14502 - ath:AT1G06390 279.256