Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1072 ATGATATGTTACCTACTATGCACATGGTGCGTCCTTAAAGCAGGTCCTCTGTTTTGTTCTATGTTCAAACCTGTGGCAATCATTTTCACCGCTTTCATGGGTGCAATCTTTCTTGGTGATGATTTCAGTCTTGGAAGTTTGATTGGTGCGGTTATATTCGTTGTTGGATTTTATGCCGTATTGTGGGGGAAATCGAAAGAGGAGAGTGAGATTGCAATAGGGGTTGAGAACTTGGAGTCACCATGTCACAATGTTCCTTTGTTGCAAGATAGGAACAGGTATCCAGTGTTTGGATGCAGTACAAAAATATCTCTGGCCTCGACTCTGAAGATGAACTGCCGCTATCTCATTAGCTACGAAGCATATCCTATTCTTCCCTTCTACTAG 387 0.4238 MICYLLCTWCVLKAGPLFCSMFKPVAIIFTAFMGAIFLGDDFSLGSLIGAVIFVVGFYAVLWGKSKEESEIAIGVENLESPCHNVPLLQDRNRYPVFGCSTKISLASTLKMNCRYLISYEAYPILPFY* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1072 128 SUPERFAMILY Multidrug resistance efflux transporter EmrE 2 66 - -
Vra2g1072 128 PANTHER WAT1-RELATED PROTEIN 3 88 - -
Vra2g1072 128 PANTHER WAT1-RELATED PROTEIN 3 88 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1072 Vra-Chr2 11849478 11857168 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1072 2 92 Nodulin-like Gene Family AT3G28070 40.659 1.19e-19 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1072 - - vra:111240720 267.7