Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1028 ATGTCTTTCTCTAAAACTCCTTTTTCTCAATTGATTTTAGTCATTCTTTTGTCCTTTTCAACTATTATTCACAGTACTATCATAGAAACAAAATGTTTACAAAACAAAACTAGTGTTCCCGGACTGATTGTGTTTGGGGACTCCATACTAGATACAGGTAATAATGACTACATTATGACTGCAATGAAATGTAATTTTCAACCATATGGTAAAGATTTTGGTGGAGGAAATCAACCAACTGGGAGGTTCAGCAATGGTTTAATCCCTTCAGATTTCATTGCTGAAAAATTACATCTCAAGAAGCTTTTGCCTCCTTATCTTGATCCAAATTTGAAACGTAAAGATCTTCTCACAGGTGTTTGCTTTGCATCTGGTTCCAGTGGATATGATCCTCTAACTTCTAAACTAGCATTAGTGCTATCATTATCAGATCAACTATTCAAATTCATGGAATACAAAACCAAGATACATGACTTTGTTGGTGAAAAAAGAGCAACAACAATTATATCGAAAAGCATATACATCTTGAGCTCAGGCAGCAACGATATTGCCAATAATTTCTTTGCGTTACCATTTAGGAGACTACAGTATAATATTGAAACTTACACAGATTTCTTGGTTTCAGAAGCTACCAAATTCTTACAAGATCTTTATGGACTTGGAGCTAGAAAGATTGGAGTACTTGGTTTGCCAAATTTAGGGTGTGTGCCTTCTCAAAGAACACTCAAAGGAGGATTTCTCAGGACATGTTCAGATCCTGAAAACCAGGCTGCAATGCTCTTTAACAAGAAGCTATCTTCCCAATTAGATATCCTCGGGAAAAAATTTCCTGATGCTAAATTTGTCTACATTGATATTTACAGTATATTATCGGATATGGTTCAAAATCCTACTAAATATGGTTTTGAAGTAGCAGATAAAGGATGTTGTGGCACGGGAGATCTTGAAGTAGGGCTTCTGTGTAACCCTCTTTCCTTGGGGATATGTTCAAACAGGTCAAATTACATATTTTGGGACAGTTTCCATCCTACGGAAAAGGCATACAATATTATTTCTACTGAAGTGTTTGATAAAAACGTCAATAAATTCTTCTAA 1095 0.3525 MSFSKTPFSQLILVILLSFSTIIHSTIIETKCLQNKTSVPGLIVFGDSILDTGNNDYIMTAMKCNFQPYGKDFGGGNQPTGRFSNGLIPSDFIAEKLHLKKLLPPYLDPNLKRKDLLTGVCFASGSSGYDPLTSKLALVLSLSDQLFKFMEYKTKIHDFVGEKRATTIISKSIYILSSGSNDIANNFFALPFRRLQYNIETYTDFLVSEATKFLQDLYGLGARKIGVLGLPNLGCVPSQRTLKGGFLRTCSDPENQAAMLFNKKLSSQLDILGKKFPDAKFVYIDIYSILSDMVQNPTKYGFEVADKGCCGTGDLEVGLLCNPLSLGICSNRSNYIFWDSFHPTEKAYNIISTEVFDKNVNKFF* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1028 364 Gene3D SGNH hydrolase 28 360 IPR036514 -
Vra2g1028 364 SUPERFAMILY SGNH hydrolase 160 357 - -
Vra2g1028 364 Pfam GDSL-like Lipase/Acylhydrolase 43 353 IPR001087 GO:0016788
Vra2g1028 364 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 8 363 - -
Vra2g1028 364 CDD SGNH_plant_lipase_like 40 359 IPR035669 -
Vra2g1028 364 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 42 53 IPR008265 GO:0006629|GO:0016298
Vra2g1028 364 PANTHER GDSL ESTERASE/LIPASE EXL3 8 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1028 Vra-Chr2 11006778 11008269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1028 9 355 Pollen Coat Proteome AT1G75910 41.193 2.53e-80 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1028 - - gmx:100808475 489.574