LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra2g1027	ATGATATTTTCAAATAACTTTAATTGGAGGCTTTCCTTTTTTTTTGGGCTCTTGAAAAACATCAGAGGAGGAGAAACAAAAAATTTGAGAACAATGTCTTTTGGAACAATGAACGTCATTAATTTACGATTTTGCCACTCTCCCCAACTCCTTCATTCACCAAATCTCCTCTTCCCTGTTCCTTCTTCACAAACTCCAAACTTCACTCTGAGAAACCCAACAACCCCATTTGCTATTTCCTTAAAAAATCGTTTCTTTTCTCCAATTCGTGCGTCCATGGCCTCCTCAGCATCCGTCACGGAGAACGAAACAAAGCCATTTTCCGTTCTCTTCGTGTGCCTTGGCAACATCTGCAGAAGCCCCGCTGCCGAAGGAGTCTTCACTGACCTAGTCAACAAAAAGAGCCTCAATTCAATTTTCAGAATTGATTCGGCTGGCACCATCAATTACCACGAGGGAAATGAAGCGGACCCGAGAATGAGGGCAGCCTCAAAGAGGCGTGGGATTCAGATAACTTCTATTTCAAGGCCAATCAAGCCCTCTGATTTCACTGACTTTGACCTCATTCTGGCTATGGACAAGCAGAACAGAGAGGACATACTGGAGGCCTTTAATAGATGGAAAGGAAAACATTCCTTACCGGATGATGCACATAAAAAGGTTAAGTTGATGTGCTCATATTGTAAGAAGCATGATGAAAGTGAAGTCCCGGATCCCTATTATGGTGGAGCGCAAGGGTTTGAGAAGGTGTTGGATTTGCTAGAAGATGCTTGCGGATCATTACTGGAAACCATTTTGGCAGAAAATAAACATTTTCAAGAATCCTAA	828	0.4239	MIFSNNFNWRLSFFFGLLKNIRGGETKNLRTMSFGTMNVINLRFCHSPQLLHSPNLLFPVPSSQTPNFTLRNPTTPFAISLKNRFFSPIRASMASSASVTENETKPFSVLFVCLGNICRSPAAEGVFTDLVNKKSLNSIFRIDSAGTINYHEGNEADPRMRAASKRRGIQITSISRPIKPSDFTDFDLILAMDKQNREDILEAFNRWKGKHSLPDDAHKKVKLMCSYCKKHDESEVPDPYYGGAQGFEKVLDLLEDACGSLLETILAENKHFQES*	276

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra2g1027	275	Pfam	Low molecular weight phosphotyrosine protein phosphatase	109	262	IPR023485	-
	Vra2g1027	275	Gene3D	-	90	270	-	-
	Vra2g1027	275	CDD	LMWPTP	108	263	-	-
	Vra2g1027	275	SMART	LMWPc_2	107	264	IPR023485	-
	Vra2g1027	275	PRINTS	LMW phosphotyrosine protein phosphatase signature	109	126	IPR017867	GO:0004725\|GO:0006470
	Vra2g1027	275	PRINTS	LMW phosphotyrosine protein phosphatase signature	152	168	IPR017867	GO:0004725\|GO:0006470
	Vra2g1027	275	PRINTS	LMW phosphotyrosine protein phosphatase signature	236	251	IPR017867	GO:0004725\|GO:0006470
	Vra2g1027	275	PANTHER	LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED	41	270	-	-
	Vra2g1027	275	SUPERFAMILY	Phosphotyrosine protein phosphatases I	105	265	IPR036196	-

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vra2g1027	71	269	Protein tyrosine phosphatase (PTP) family	AT3G44620	60.177	2.80e-90	266

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra2g1027	K25307		-	gmx:100797254	398.667

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