Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1027 ATGATATTTTCAAATAACTTTAATTGGAGGCTTTCCTTTTTTTTTGGGCTCTTGAAAAACATCAGAGGAGGAGAAACAAAAAATTTGAGAACAATGTCTTTTGGAACAATGAACGTCATTAATTTACGATTTTGCCACTCTCCCCAACTCCTTCATTCACCAAATCTCCTCTTCCCTGTTCCTTCTTCACAAACTCCAAACTTCACTCTGAGAAACCCAACAACCCCATTTGCTATTTCCTTAAAAAATCGTTTCTTTTCTCCAATTCGTGCGTCCATGGCCTCCTCAGCATCCGTCACGGAGAACGAAACAAAGCCATTTTCCGTTCTCTTCGTGTGCCTTGGCAACATCTGCAGAAGCCCCGCTGCCGAAGGAGTCTTCACTGACCTAGTCAACAAAAAGAGCCTCAATTCAATTTTCAGAATTGATTCGGCTGGCACCATCAATTACCACGAGGGAAATGAAGCGGACCCGAGAATGAGGGCAGCCTCAAAGAGGCGTGGGATTCAGATAACTTCTATTTCAAGGCCAATCAAGCCCTCTGATTTCACTGACTTTGACCTCATTCTGGCTATGGACAAGCAGAACAGAGAGGACATACTGGAGGCCTTTAATAGATGGAAAGGAAAACATTCCTTACCGGATGATGCACATAAAAAGGTTAAGTTGATGTGCTCATATTGTAAGAAGCATGATGAAAGTGAAGTCCCGGATCCCTATTATGGTGGAGCGCAAGGGTTTGAGAAGGTGTTGGATTTGCTAGAAGATGCTTGCGGATCATTACTGGAAACCATTTTGGCAGAAAATAAACATTTTCAAGAATCCTAA 828 0.4239 MIFSNNFNWRLSFFFGLLKNIRGGETKNLRTMSFGTMNVINLRFCHSPQLLHSPNLLFPVPSSQTPNFTLRNPTTPFAISLKNRFFSPIRASMASSASVTENETKPFSVLFVCLGNICRSPAAEGVFTDLVNKKSLNSIFRIDSAGTINYHEGNEADPRMRAASKRRGIQITSISRPIKPSDFTDFDLILAMDKQNREDILEAFNRWKGKHSLPDDAHKKVKLMCSYCKKHDESEVPDPYYGGAQGFEKVLDLLEDACGSLLETILAENKHFQES* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1027 275 Pfam Low molecular weight phosphotyrosine protein phosphatase 109 262 IPR023485 -
Vra2g1027 275 Gene3D - 90 270 - -
Vra2g1027 275 CDD LMWPTP 108 263 - -
Vra2g1027 275 SMART LMWPc_2 107 264 IPR023485 -
Vra2g1027 275 PRINTS LMW phosphotyrosine protein phosphatase signature 109 126 IPR017867 GO:0004725|GO:0006470
Vra2g1027 275 PRINTS LMW phosphotyrosine protein phosphatase signature 152 168 IPR017867 GO:0004725|GO:0006470
Vra2g1027 275 PRINTS LMW phosphotyrosine protein phosphatase signature 236 251 IPR017867 GO:0004725|GO:0006470
Vra2g1027 275 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 41 270 - -
Vra2g1027 275 SUPERFAMILY Phosphotyrosine protein phosphatases I 105 265 IPR036196 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1027 71 269 Protein tyrosine phosphatase (PTP) family AT3G44620 60.177 2.80e-90 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1027 K25307 - gmx:100797254 398.667