Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1014 ATGGGTTGTTGTGTCTCGACAAGCAGTAGAAGTACTTGTAGCAGCAAGAGCAATGGAGATACGGTCTCTCCATCTTGTTTAGAAATTGGATTCTGTGGGCAGAAGAGAACAAGACGAACATTCTCTGATCATGTTATTTCTCTTCACCATTTACCATCCTTACCTAGCAGAATTTTCTCTAATGGAAAGAGCCGGGGTTCGTGCATCTTTACGCAGCAGGGCCGCAAGGGTATTAATCAGGATGCCATGATTGTGTGGGAAGATTTCATGTCTGAAGATATGATCTTTTGTGGTGTTTTTGATGGGCATGGTCCGCACGGTCATCTTGTTGCACGCAAAGTTAGGGATGCTCTACCTCTTAAACTGCTATCATTTTTGCATTCTTCTGAATCAAAGCGAAATGGGTCTGGTAAAACTTGCTTCAAAGGGAATGTAAAATCTGATAGTGTAGAATTTGAGAAGGATTGCTCCACAGAGGATAAAATGAACTCTATGTGGAGAGAAGCTTTCATGAAGGCATACAAGGCTATGGATAAGGAGCTCAGGTCCCATCCAAATTTGGATTGCTTCTGCAGTGGGAGCACTGCTGTGACTATAGTGAAGCAGGGTTCCAATCTGTTCATGGGCTATATTGGGGATTCTCGGGCAATCATGGGATCAAAGGATAGCAATGATTCAATGGTGGCTATTCAGTTAACTGTGGATTTGAAGCCTGATTTGCCAAGGGAAGCAGAAAGAATTAAGCGCTGCAAAGGTAGGGTATTTGCTTTGCAAGATGAGCCTGAAGTGCCTAGGGTGTGGTTGCCCTTTGATGATGCACCAGGATTAGCAATGGCCAGAGCCTTTGGAGATTTCTGCTTGAAGGAGTATGGAGTGATTTCTATCCCCGAGTTTTCCCATCGGCAGCTTACTGACAGAGATCAATTCATTGTTCTTGCATCAGACGGGGTGTGGGATGTTTTAAGCAATGAGGAGGTGGTTGAAATAGTATCTTCAGCACCAACACGATCATCAGCAGCAAGGATTCTGGTAGATTCTGCTGCCAGGGAGTGGAAACTGAAATACCCTACTTCAAAGATGGATGACTGCGCTGTAGTATGCTTATTTTTGGATGGGAAAATGGACTCAGAATCTGATTATGATGAACAAGGCTTTTCGTCTGCAACCATACAGAGCAACCATTCAGGTAACCCCATTGAGTCAGATGATGGACAAAAGTCTGAGCCATCATTGCAGAGGAACTTCACTGTGAGATCCTCAGAAGAAAATGAGACTAATGTAGCACTAACTGTTGATGTCGAAGATGGAACATCATCAGCTGATGATCAAAACTGGTCAGGTTTGGAAGGGGTCACTCGTGTAAACTCACTTGTCCAACTTCCTAGATTTTCTGAGGAAAGGCCAAACTCTTGA 1413 0.4388 MGCCVSTSSRSTCSSKSNGDTVSPSCLEIGFCGQKRTRRTFSDHVISLHHLPSLPSRIFSNGKSRGSCIFTQQGRKGINQDAMIVWEDFMSEDMIFCGVFDGHGPHGHLVARKVRDALPLKLLSFLHSSESKRNGSGKTCFKGNVKSDSVEFEKDCSTEDKMNSMWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRQLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQGFSSATIQSNHSGNPIESDDGQKSEPSLQRNFTVRSSEENETNVALTVDVEDGTSSADDQNWSGLEGVTRVNSLVQLPRFSEERPNS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1014 470 MobiDBLite consensus disorder prediction 381 447 - -
Vra2g1014 470 SMART PP2C_4 50 368 IPR001932 -
Vra2g1014 470 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 458 - -
Vra2g1014 470 SUPERFAMILY PP2C-like 57 372 IPR036457 -
Vra2g1014 470 CDD PP2Cc 65 370 IPR001932 -
Vra2g1014 470 MobiDBLite consensus disorder prediction 1 21 - -
Vra2g1014 470 Pfam Protein phosphatase 2C 97 347 IPR001932 -
Vra2g1014 470 PANTHER ALPHABET, ISOFORM E-RELATED 1 458 - -
Vra2g1014 470 Gene3D - 58 378 IPR036457 -
Vra2g1014 470 MobiDBLite consensus disorder prediction 380 447 - -
Vra2g1014 470 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1014 Vra-Chr2 10752824 10757829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1014 1 470 PP2C-type Phosphatase Gene Family AT1G03590 70.711 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g1014 - - gmx:100813306 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1014 2 10752824 10757829 Vra2g1014 2 10752824 10757829 ECH
Vra2g1014 2 10752824 10757829 Vra2g1014 2 10752824 10757829 PCT