Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0995 ATGCGTTGGTCTTCCAGATTCTTTCACACAGCCTCGAGGGTTTACAATGAGTATCCATCATGGTCCAAGTCTATTCTTGTTTGCACTGTCATCAGTGGAGGAGGAGCAGTGGCATTTTGCGATTCCAAACCAGAACATAGCAAAGAACCTCCAAAGAAGAAGGTGGTGGTGCTTGGAACTGGTTGGGCTGGCACCAGTTTTCTGAAAAATATGAAAAGCAACTCCTATGATATTCATGTGGTTTCACCACGTAACTATTTTGCATTCACGCCATTGCTACCAAGTGTAACATGTGGCTCAGTGGAAGCAAGGAGCGTCGTTGAACCCATTCGCAGTATCACCCGCAGGAGTGGTGTAAACATTAGTTTTAGTGAAGCTGAATGCTACAAGATCGATCAAAAGAATAACAAAGTTTTTTGTCGTGCTGTGAAAGATAAGTCTGGTGAACGAGAAGAATTCTCCATTGATTATGATTACCTGGTAATAGCTATGGGAGGTCGTTCTAATACCTTCAACACACCTGGTGTTGAGGAACACGCCCATTTCCTGAAGGAAGTGGATGAAGCTCTAAAAATCCGTAGGAAAGTGGTTGAACTTTTTGAAAGAGCTAGCCTCCCTACTTTACCAGAGGAAGAGAAGAAAAAGCTTCTGAGTTTTGTAGTCGTTGGTGGTGGTCCAACTGGGGTAGAATTTTCTGCTGAACTTCATGACTTCGTACATGAGGATCTGGCTTATTTATATCCTGAACTTGAAAAGTATGCGAAGATTACTCTCTTGGAGGCAGGCGATCATATCTTAAACATGTTTGACAAGAGAATTACTGAATTTGCTGAACAAAAGTTTGCTAGAGATGGCATTAATGTGAAGTTGGGATCTATGGTTGTGAAAGTTAGTGAAAAGGAAATCACTTCCAAAGAAAGGTCAACTGGTGAAATTGTTACCATACCTCACGGAATGGTAGTTTGGTCAACTGGTATTGGTGCTCGCCCTGAAATAGTTGAATTTATGAAACAGCTTGGCCAGATTAACAGACGTGCATTGGTCACTGATGAATGGCTAAGGGTGGAAGGATCTGACAACATCTATGCTCTTGGTGATTGTGCCACTGTAAATCAACGTAGAGTTATGGAAGATATAGCCGTGATATTTAGCAAGGCTGACAAGAACAATTCCGGAAAATTAGATCTTAAAGAATTTAAAGACGTTGTTGATGACATTATTGAAAGGTACCCTCAAGTGGAAATTTATTTAAAGAAGAACCAAATGAAAGACATGGCCAGCTTGCTAAAGAAATCCCAAGAAAGCGGCATTTCAGTGGACATTGAATACTTCAAAGAAGCCCTTTCCAAAGTAGACTCTCAGATGAAAAATCTTCCTGCCACAGCTCAGGTAGCTGCACAGCAAGGAGTGTATCTTGCAGACTGTTTCAACCGCATGGAGGATTGTGAGAGGTATCCTGAAGGCCCTCTCAGGTTCAGAGGAGTTGGTCGCCATCGATTCCGTCCCTTCAGGTACAAGCATTTAGGACAATTTGCTCCACTGGGAGGAGAGCAAACTGCAGCTCAGCTTCCAGGAGATTGGATTTCAATCGGTCAGAGCACCCAGTGGCTCTGGTATTCAGTGTATACAAGCAAACAAGTGAGCTGGAGAACAAGGTTTTTGGTGGTTGGTGACTGGGGGAGACGATTCTTGTTTGGTAGGGATTCAAGTCAAATCTAA 1719 0.4276 MRWSSRFFHTASRVYNEYPSWSKSILVCTVISGGGAVAFCDSKPEHSKEPPKKKVVVLGTGWAGTSFLKNMKSNSYDIHVVSPRNYFAFTPLLPSVTCGSVEARSVVEPIRSITRRSGVNISFSEAECYKIDQKNNKVFCRAVKDKSGEREEFSIDYDYLVIAMGGRSNTFNTPGVEEHAHFLKEVDEALKIRRKVVELFERASLPTLPEEEKKKLLSFVVVGGGPTGVEFSAELHDFVHEDLAYLYPELEKYAKITLLEAGDHILNMFDKRITEFAEQKFARDGINVKLGSMVVKVSEKEITSKERSTGEIVTIPHGMVVWSTGIGARPEIVEFMKQLGQINRRALVTDEWLRVEGSDNIYALGDCATVNQRRVMEDIAVIFSKADKNNSGKLDLKEFKDVVDDIIERYPQVEIYLKKNQMKDMASLLKKSQESGISVDIEYFKEALSKVDSQMKNLPATAQVAAQQGVYLADCFNRMEDCERYPEGPLRFRGVGRHRFRPFRYKHLGQFAPLGGEQTAAQLPGDWISIGQSTQWLWYSVYTSKQVSWRTRFLVVGDWGRRFLFGRDSSQI* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0995 572 ProSitePatterns EF-hand calcium-binding domain. 387 399 IPR018247 -
Vra2g0995 572 PANTHER NADH DEHYDROGENASE 71 572 IPR045024 GO:0003954|GO:0006116
Vra2g0995 572 SUPERFAMILY EF-hand 370 458 IPR011992 -
Vra2g0995 572 SUPERFAMILY FAD/NAD(P)-binding domain 52 270 IPR036188 -
Vra2g0995 572 SUPERFAMILY FAD/NAD(P)-binding domain 219 371 IPR036188 -
Vra2g0995 572 PRINTS FAD-dependent pyridine nucleotide reductase signature 55 74 - -
Vra2g0995 572 PRINTS FAD-dependent pyridine nucleotide reductase signature 157 175 - -
Vra2g0995 572 PRINTS FAD-dependent pyridine nucleotide reductase signature 218 236 - -
Vra2g0995 572 PRINTS FAD-dependent pyridine nucleotide reductase signature 346 368 - -
Vra2g0995 572 SMART efh_1 378 406 IPR002048 GO:0005509
Vra2g0995 572 Pfam Pyridine nucleotide-disulphide oxidoreductase 53 377 IPR023753 GO:0016491
Vra2g0995 572 PANTHER NAD(P)H DEHYDROGENASE B2 71 572 - -
Vra2g0995 572 Gene3D - 43 422 - -
Vra2g0995 572 Gene3D - 423 571 - -
Vra2g0995 572 ProSiteProfiles EF-hand calcium-binding domain profile. 374 409 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0995 Vra-Chr2 10449997 10454270 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0995 7 572 Chloroplast and Mitochondria Gene Families AT4G21490 66.551 0.0 776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0995 K03885 - gmx:100820044 1025.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0995 2 10449997 10454270 Vra2g0995 2 10449997 10454270 ECH