Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0993 ATGGATAACTATCCATTTTTGGATTCTCAAATGAATTCTGATTTTATGTCAGAATTTTCTTCCTTTATAAACGAAGTCGGTGAGGGTGATTACACAGATATATTTTCTACTGATCAAATATTCCCATCACGCGATGATATGATTGATTGGGTTCGGAAGATTGCATTTCAGCTTGGATTTGTGGTCGTCATCATAAGATTTGACACAACAACTGGTGAACCTAGAAGAAAGACATTCGTTGTGTTAGGCTGTGAAAGGAGTGGGAAATATAGGAAGTATAAGCAAGACGTGCAACCTAGTGTGTCTGGCACGAGAAAATGTGAGTGTCCATTTAAGTTGAGGGGTAAACCTAAAGGACACGGTTGGGTGTTAAAGGTTATGTGTGGTTATCACAACCATGAATTGGCCGAGACTTTGGTCGGTCATCCTTATGCGGGGAGGTTAAATGCTGTTGAACAGTCAATTCTTATTGACATGACTAAGAGTCAAGTTAAACCCTCAAATATTCTTTTGACTCTTAAAGAACATAATGAAGATAACGTGACAACTATAAAACAAATATATAACGCGAGATACACTTACAAACGATCTTTGAGAGGGTCGAGAACTGAAATGCAACAGTTGATGATGTTGTTAGATAGAGACAAACACATCCAACATAGTAGATGTTTGGAAGATTCTGACGTAGTAAGTGACCTATTTTGGACACATCCTGATTCAGCGCACCTGGTCAATTCATTTAATATTGTTTTCTTAATGGATACGACGTACAAGACAAACAAATATCGTCTTCCGTTGCTTGAGATCGTTGGAGTCACGTCCACTGGTTTGACATTCACAGCTGCCTTTGCATTGCTTTCAAGTGAACGCCAAAATAATTTCACTTGGGCATTGGAAATGTTTAGACGATTACTATTGACAACAGAGGCGAATGTGAAAGCGAAATGCAAGATGTTAGTGGATAATGCTGAGGCATGGGATGGGTTGATGGAAGTATGGCAAAATGTGATGGACTGTGACGACCAGTCCAAGTTTGGTGGTTATGTTTATCGTTTTGAGTATGCCTCTACTGCGTGGCCTTTATTTTTTGATTATGTCAACCGTACATGGATCATGCCGTATAAGACATGCTTCGTCAAGGCGTGGACGAACAAAGTCATGCATCTAGGCAACACTACAACAAACAGACTTGTTGGACGTGTTTCACGATACGCTCTTGAACTTATTGCTGATGAAGTAGAGCGAGTGAATAAAATAGGTTTGGACAGTGCTCGTTGTGGATGCATTTTGAGCTCAACGTATGGCCTACCATGTGCTTGTATGTTAGCACGATATGAGCCTGGAATGATTCCTATTGGTGAAATACATGTTATCTGGACCCGTTTAAGCATTTCAAGAACTGTGTCTACTGAATCGCTTCCAGAGTTTAGCCTTGATCGTGAAGTTCAACTGGTACATGAACGATTCAAAAATGTTGACATTGGTGGAAAAGTCAACATAAGACATAAGATGCTAGAAATTGCTTGCCCAGAGATGACATCTATGCTTGCTCCGGCGCATAAAGTGAAGACAAAAGGTGCACAGAAGACTAAGGTTGCACGACATGAGAGGTCTACGAAACGTGACCCATCATATTTTGAGCACGTTTACACTTTTATTTCCAGGACAGAGCCTTCTTCTTCACGAAAATCTCAAGTCAAATCGAAGCTGAAAGAATTTGCGCGAAGTGTTGTACCATTCTTAAATCAATTTCATCCGATTTGTCAACCATACATTGTCAATGTTGTCGATGTTGTTGCCGATGGTCATTGCGGTTATCGATGCATTACTGCTTTGTTGGGTCTAGGTGAAGAGGCATGGCCTACTATCCGACATAACCTTTATGAAGAACTAACTCAGTGGCGTGATGAATACGCAAATTTAGTAGGAAACTACGATCGATTGGAAGAACTACGTCAGTCATTAATTGTCCACGATCGATCACAAGTTAATGCTAAGAAGTGGATGACGATACCGAACATTGGTTATGCCATTGCAAATAGATACAATGTCATCTTAGTATGTTTATACTATGTTCAGAGTTTTACCATATTCCCACTTCGCACTCCACCGCCTACTGATATTAGACAACATCGGATCTTATGCATTGGATTTGTTAATGGATGTCATTTTGTACAGGTTCAATTACAAGATGGTTGTCCGTTACCCATGGTGGACATCATTTCCTCAAACCATTGTTACCCAGAGGCACGATCATGGTCAACATTTTATACACATAGGATGCAATCATTTATGGCATTGATGGGAGCTAATCAAAGTTATGTAGATCTTGGAGAAGACTGA 2343 0.4003 MDNYPFLDSQMNSDFMSEFSSFINEVGEGDYTDIFSTDQIFPSRDDMIDWVRKIAFQLGFVVVIIRFDTTTGEPRRKTFVVLGCERSGKYRKYKQDVQPSVSGTRKCECPFKLRGKPKGHGWVLKVMCGYHNHELAETLVGHPYAGRLNAVEQSILIDMTKSQVKPSNILLTLKEHNEDNVTTIKQIYNARYTYKRSLRGSRTEMQQLMMLLDRDKHIQHSRCLEDSDVVSDLFWTHPDSAHLVNSFNIVFLMDTTYKTNKYRLPLLEIVGVTSTGLTFTAAFALLSSERQNNFTWALEMFRRLLLTTEANVKAKCKMLVDNAEAWDGLMEVWQNVMDCDDQSKFGGYVYRFEYASTAWPLFFDYVNRTWIMPYKTCFVKAWTNKVMHLGNTTTNRLVGRVSRYALELIADEVERVNKIGLDSARCGCILSSTYGLPCACMLARYEPGMIPIGEIHVIWTRLSISRTVSTESLPEFSLDREVQLVHERFKNVDIGGKVNIRHKMLEIACPEMTSMLAPAHKVKTKGAQKTKVARHERSTKRDPSYFEHVYTFISRTEPSSSRKSQVKSKLKEFARSVVPFLNQFHPICQPYIVNVVDVVADGHCGYRCITALLGLGEEAWPTIRHNLYEELTQWRDEYANLVGNYDRLEELRQSLIVHDRSQVNAKKWMTIPNIGYAIANRYNVILVCLYYVQSFTIFPLRTPPPTDIRQHRILCIGFVNGCHFVQVQLQDGCPLPMVDIISSNHCYPEARSWSTFYTHRMQSFMALMGANQSYVDLGED* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0993 780 Coils Coil 631 651 - -
Vra2g0993 780 ProSiteProfiles OTU domain profile. 593 730 IPR003323 -
Vra2g0993 780 Pfam MULE transposase domain 250 316 IPR018289 -
Vra2g0993 780 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 102 304 IPR031052 GO:0006355
Vra2g0993 780 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 102 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0993 Vra-Chr2 10424465 10427311 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vra2g0993 MULE 9.8e-14 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0993 - - vun:114195084 863.988