Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0985 ATGGAGTTTGACCTTGAAAACCCTTTGGAAAATCTTCACTCCGATGCTGTCTCTTATCTCTTCCTCATTGAATCTGACCACACCCTATCACAGAATCATTCTCACACTCTCAAAGCTAGAGATCTTGACATCTCTGTCAGAAGAGAACTTGTCTCCTTAATCGCAAAGTTGTCCTGCACTTTGGATCCGGCTTTGTCTTATCTTGCTACCAACTATCTGGATCGGTTCCTAGCCAGCCAAGGGATTTCGCAACCGAAGTCATGGGTCCTCAGGCTCATTGCTGTCTCTTGTATTTCTCTAGCTGTCAAGATGATGAGAACTGAATGCCCAGATGTTCAGGATATTTTGAATCAAAGTGATGGGGGCATCATCTTTGAGACACAAACAGTGGGAAGAATGGAAGCACTTATCTTGGGAGCATTACAATGGAGAATGCGGTCGATCACTCCATTCTCTTTCATACCTTTCTTCATTGCCTTGATGGGGCTCCAAGGCTCACCAACGGGGAGGGTTCTGAAAAACCGTGCTTCTGAAATCATATTCATGTCACAAAGAGAGATAAGAGTTTGGGAGTTCAAGCCATCTATGATTGCAGCATCTGCTCTTTTGTGTGCTTCTCATGAGTTGTTTCCTTTTCAATATCCGTCCTTCTTAAAAGCAATAACCGAGTCTTCATATGAAAGCGTGGAGCAGTGCTACAAAGTGATACAAGACATAGCCATAGAGGAGGAGTACGAGTCTGCGTTGAATGGGGTTTCAAGGTCAGACACACCGATTAATGTGTTGGACCATCATTTTCTCAGCTCAGAAAGTGAAAAAACCAACGGAATCACCGTTGCTGATTCTCCTCTGAGACAAGAGAGGGACCTCAAAAGAAGGAAAATCACTCCATGTGGAAACAATCCAACGATCCACAACTCTTGA 924 0.4394 MEFDLENPLENLHSDAVSYLFLIESDHTLSQNHSHTLKARDLDISVRRELVSLIAKLSCTLDPALSYLATNYLDRFLASQGISQPKSWVLRLIAVSCISLAVKMMRTECPDVQDILNQSDGGIIFETQTVGRMEALILGALQWRMRSITPFSFIPFFIALMGLQGSPTGRVLKNRASEIIFMSQREIRVWEFKPSMIAASALLCASHELFPFQYPSFLKAITESSYESVEQCYKVIQDIAIEEEYESALNGVSRSDTPINVLDHHFLSSESEKTNGITVADSPLRQERDLKRRKITPCGNNPTIHNS* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0985 307 Pfam Cyclin, C-terminal domain 148 244 IPR004367 -
Vra2g0985 307 SUPERFAMILY Cyclin-like 130 241 IPR036915 -
Vra2g0985 307 SMART cyclin_7 48 139 IPR013763 -
Vra2g0985 307 SUPERFAMILY Cyclin-like 13 145 IPR036915 -
Vra2g0985 307 Pfam Cyclin, N-terminal domain 21 145 IPR006671 -
Vra2g0985 307 CDD CYCLIN 47 138 IPR013763 -
Vra2g0985 307 Gene3D - 23 234 - -
Vra2g0985 307 PANTHER CYCLINS 5 297 IPR039361 -
Vra2g0985 307 Gene3D - 30 146 - -
Vra2g0985 307 PANTHER CYCLIN-D6-1-RELATED 5 297 - -
Vra2g0985 307 SMART Cyclin_C_2 148 258 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0985 Vra-Chr2 10297677 10300539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0985 1 292 Core Cell Cycle Gene Families AT4G03270 41.346 6.72e-65 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0985 K18812 - gmx:100820404 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0985 2 10297677 10300539 Vra2g0985 2 10297677 10300539 ECH
Vra2g0985 2 10297677 10300539 Vra2g0985 2 10297677 10300539 PCT