Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra2g0975 | ATGTTGAACAAGAAACCACCCTTGTTATGGCTTTCTCTCCTCATCACATGCTTCTTCTCTTTCCACACCTGTACTTCACTCGCAGCTTTGACCACCATCTCAGCAAATCAATCTCTCTCTGGGGATCAAACTCTTGTCTCCCAAAATGGAACCTTTGAATTGGGTTTCTTCACCACAGGTAACAACTCTAAATACTATATAGGCATGTGGTACAGAAAGATATCTCAAAAGACTTATGTTTGGGTCGCAAATAGAGACGACCCAGTTTCTGATAAGAATTCTGCTAAATTAACAATATTGGATGGTAATTTAGTGGTATTAGACCAGTCCCAAAATATAGTTTGGTCAACCAATTTGAGTTCTCCTAGCTCAGGTTCTGTGGTAGCCATGCTTCTAGATTCTGGGAATCTTATATTAAGTGATAGGCCTAATGCATCGGCAACTGATGCTATGTGGCAGAGTTTTGATCACCCCACAGACACGTGGCTTCCCGGTGGCAAGATAAGTTTGAACAACAAAACAAAGAAGCCACAGTATCTGACTTCATGGAAGAATGTTGAAGATCCTGCAACGGGAATGTTCTCTCTTGAACTAGACCCTGAAGGAAGCAATTCGTATTTGATTCGTTGGAATAGAACTGAGCAGTATTGGTCAAGTGGTTCTTGGAATGGACACATTTTCAGCTTGGTTCCTGAGATGAGACTAAACTACATCTACAATTTCACCTTTGTGTCCAACGAGAACGAGAGCTACTTCACCTACTCTTTGTATAACGAGTCTATTATATCTCGCTTTTTTATGGATGTCTCGGGTCAGATTAAGCAACTGACGTGGCTGGAGAATGCTCAGCAGTGGAATTTGTTCTGGTCTCAGCCTCGGCAACAGTGTGAGGTGTATGCCTTCTGTGGTGGATTTGGGACCTGCACTGAGAATTCCAAGCCATATTGTAGTTGTTTGACTGGGTATGAGCCAAAGTCACAATCTGATTGGAATCTTACGGATTACTCAGGGGGGTGTGTGAGAAAGACGGAGTTGCAATGTGCCTCACCAAACTCCTCTAACAAGGACAGTGACAGGTTCCTTTCAATTCTCAACATGAAATTGCCTAATCATTCACAATCCATAGGAGCCGGGAATGTTGGGGAATGTGAAACAACATGCTTGAGTAACTGTTCTTGTACTGCATATGCTTATGACAATAATGGTTGTTCAATTTGGTATGGTGATCTCTTGAACCTGCAACAGCTTACTCAAGATGACAGCAGTGGGCAGACTTTGTTTCTCAAACTTGCAGCGTCTGAGTTTCATGATTCTAAAAGCAATAAAGGGACACTCATTGGTGCTGTTGCTGGAGCTGTTGGTGGTGTGGTGGTTCTTGTAATTGTTTTGGTGTTTGTGATTCTGCGGCGCAGAAAGAGACATGTTGGGATAGGAACAACTGTGGAGGGCTCATTGGTGGCATTTGGGTATAGGGATTTGCAAAATGCCACGAAGAATTTCTCAGAGAAACTGGGAGGAGGGGGTTTTGGCTCTGTCTTCAAAGGAACATTGTCTGATTCTAGTGTCATTGCAGTAAAGAAGCTTGAAAGCATTAGCCAAGGTGAGAAGCAGTTCAGAACAGAAGTGAGCACAATTGGGACAGTCCAACATGTGAATCTTGTAAGGCTTCGCGGGTTCTGCTCCGAAGGTACTCAAAAACTTCTGGTTTATGATTACATGCCAAATGGTTCCTTGGATTCGAAAATGTTTCAGGAAGATGGATCAAAGGTGTTGGATTGGAAACTGAGGTACCAAATTGCTCTTGGAACAGCAAGAGGGTTGACTTACCTTCACGAGAAGTGTAGAGACTGCATCATACACTGTGATGTGAAGCCAGAAAACATTCTCCTTGATGCTGATTTTGTTCCAAAGGTGGCAGACTTTGGCCTTGCAAAGCTGGTTGGAAGGGACTTCAGCAGGGTCCTCACTACCATGAGAGGGACAAGAGGTTATCTTGCCCCAGAGTGGATATCAGGTGTGGCCATCACTGCAAAAGCTGATGTCTACAGCTATGGAATGATGCTTTTCGAGTTTGTGTCAGGTAGGAGGAACTCTGAGGCATCGAAAGATGGCAAAGTGAGGTTCTTCCCAACTTTTGCTGCAAACACTGTCCACCAAGAAGGGAATGTGCTTAGCTTGTTGGACCCTAGGTTGGAGGGAAATGCTGACATTGAAGAGGTCATTAGAGTCATAAAAATTGCTTCATGGTGTGTCCAAGATGATGAATCTCACAGGCCTTCAATGGGTCAGGTGGTTCAAATCCTTGAAGGGTTCTTGGATGTGACTTTACCTCCAATTCCAAGGACCCTTCAAGCCTTTGTTGACAACCATGAGAACATAGTTTTCTTCACTGACTCCAGCTCCACACAGAGTTCACAGGTAAAGAGTACCTCCTCTCAAGCCAAGAGCAACACCTCATCCAATAATTCTCAGTCCTTATGA | 2481 | 0.4377 | MLNKKPPLLWLSLLITCFFSFHTCTSLAALTTISANQSLSGDQTLVSQNGTFELGFFTTGNNSKYYIGMWYRKISQKTYVWVANRDDPVSDKNSAKLTILDGNLVVLDQSQNIVWSTNLSSPSSGSVVAMLLDSGNLILSDRPNASATDAMWQSFDHPTDTWLPGGKISLNNKTKKPQYLTSWKNVEDPATGMFSLELDPEGSNSYLIRWNRTEQYWSSGSWNGHIFSLVPEMRLNYIYNFTFVSNENESYFTYSLYNESIISRFFMDVSGQIKQLTWLENAQQWNLFWSQPRQQCEVYAFCGGFGTCTENSKPYCSCLTGYEPKSQSDWNLTDYSGGCVRKTELQCASPNSSNKDSDRFLSILNMKLPNHSQSIGAGNVGECETTCLSNCSCTAYAYDNNGCSIWYGDLLNLQQLTQDDSSGQTLFLKLAASEFHDSKSNKGTLIGAVAGAVGGVVVLVIVLVFVILRRRKRHVGIGTTVEGSLVAFGYRDLQNATKNFSEKLGGGGFGSVFKGTLSDSSVIAVKKLESISQGEKQFRTEVSTIGTVQHVNLVRLRGFCSEGTQKLLVYDYMPNGSLDSKMFQEDGSKVLDWKLRYQIALGTARGLTYLHEKCRDCIIHCDVKPENILLDADFVPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFEFVSGRRNSEASKDGKVRFFPTFAANTVHQEGNVLSLLDPRLEGNADIEEVIRVIKIASWCVQDDESHRPSMGQVVQILEGFLDVTLPPIPRTLQAFVDNHENIVFFTDSSSTQSSQVKSTSSQAKSNTSSNNSQSL* | 827 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra2g0975 | 826 | ProSiteProfiles | Protein kinase domain profile. | 498 | 772 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra2g0975 | 826 | SMART | blect_4 | 36 | 158 | IPR001480 | - | |
Vra2g0975 | 826 | CDD | B_lectin | 36 | 158 | IPR001480 | - | |
Vra2g0975 | 826 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT | 8 | 798 | - | - | |
Vra2g0975 | 826 | SUPERFAMILY | Protein kinase-like (PK-like) | 485 | 806 | IPR011009 | - | |
Vra2g0975 | 826 | ProSiteProfiles | PAN/Apple domain profile. | 347 | 431 | IPR003609 | - | |
Vra2g0975 | 826 | Pfam | PAN-like domain | 354 | 412 | IPR003609 | - | |
Vra2g0975 | 826 | CDD | STKc_IRAK | 504 | 771 | - | - | |
Vra2g0975 | 826 | Pfam | Protein kinase domain | 501 | 766 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra2g0975 | 826 | Pfam | D-mannose binding lectin | 78 | 184 | IPR001480 | - | |
Vra2g0975 | 826 | PANTHER | S-LOCUS LECTIN KINASE FAMILY PROTEIN | 8 | 798 | - | - | |
Vra2g0975 | 826 | CDD | PAN_AP_plant | 343 | 431 | - | - | |
Vra2g0975 | 826 | Pfam | S-locus glycoprotein domain | 217 | 326 | IPR000858 | GO:0048544 | |
Vra2g0975 | 826 | MobiDBLite | consensus disorder prediction | 803 | 826 | - | - | |
Vra2g0975 | 826 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 65 | 223 | IPR036426 | - | |
Vra2g0975 | 826 | Gene3D | Phosphorylase Kinase; domain 1 | 465 | 572 | - | - | |
Vra2g0975 | 826 | Gene3D | Transferase(Phosphotransferase) domain 1 | 573 | 775 | - | - | |
Vra2g0975 | 826 | Gene3D | - | 26 | 155 | IPR036426 | - | |
Vra2g0975 | 826 | SMART | ntp_6 | 355 | 430 | IPR003609 | - | |
Vra2g0975 | 826 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 618 | 630 | IPR008271 | GO:0004672|GO:0006468 | |
Vra2g0975 | 826 | SMART | serkin_6 | 498 | 772 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra2g0975 | 826 | ProSitePatterns | Protein kinases ATP-binding region signature. | 504 | 527 | IPR017441 | GO:0005524 | |
Vra2g0975 | 826 | PIRSF | SRK | 3 | 823 | IPR024171 | GO:0004674 | |
Vra2g0975 | 826 | ProSiteProfiles | Bulb-type lectin domain profile. | 30 | 152 | IPR001480 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra2g0975 | Vra-Chr2 | 10052554 | 10055775 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra2g0975 | 481 | 778 | Receptor kinase-like Gene Family | AT5G20050 | 45.541 | 6.26e-79 | 260 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Vra2g0975 | Pkinase | 3.6e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra2g0975 | - | - | gmx:100782119 | 1399.03 |