Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0968 ATGGGAAGCCAGAGTTACTTGAAGGCTTTGATTATTTGTCTGATAGCAGTAATTGGATCAACTGAAGCTCAATTGCAGCTTGGTTTTTATGCCAAAAGTTGTCCAAATGCTGAGAAGATTATTTTGAAATATGTTGCTGAGCACATCCGAAATGTTCCATCTCTGGCAGCTGCTCTCATAAGACTTCACTTCCATGATTGTTTTGTCAATGGTTGTGATGGATCAGTGCTTTTGAACTCAACACCAAACAATCAAGCTGAAAAGGACTCTCTTCCAAATCTTACACTCCGAGGCTTTGGCTTCATTGATGCAATAAAGAGCCTTGTTGAAGCTGAATGCCCTGGAGTAGTCTCTTGTGCTGATATCTTGGCTTTGACTGCCAGAGACTCTGTTCATGCCATTGGAGGACCCTTCTGGAATGTTCCAACAGGTCGAAGGGATGGACTCATCTCTAGGGCAGCAGATCCTTTAGTTAGCCTTCCTGCTCCATTTCACAACCTCACTGTTCAACTAACACTCTTTGGCAACGTTGGACTTGATGCAAACGACCTCGTATTGCTTTCTGGTGCTCACACGATCGGTGTTGCCCACTGTTCATCAATTTCAACTCGTTTATACAATTTCACTGGCGTAGGTGACACTGACCCAACTCTAGACAGTAACTATGCAACAAATCTGAAGAGCTTGAAGTGCAAGAACATCAATGATAACACCACACTTGTTGAGATGGACCCTGGAAGTCGTGATACATTTGATCTTGGCTATTACAAACAAGTCGTTAAGAGAAGAGGCTTGTTCCATTCAGATGCTGCATTGCTCAGTAGCTCTACCACAAGGTCTATTATCACTAAGCAGCTTCAATCAACTGAAGGGTTCTTTGCAGAATTTGCCAAGTCCATTGAGAAAATGGGACGAATTAATCTTAAACTTGGAACCGAAGGAGAGATAAGGAAACATTGTGCACGAGTGAATAACTAA 978 0.4254 MGSQSYLKALIICLIAVIGSTEAQLQLGFYAKSCPNAEKIILKYVAEHIRNVPSLAAALIRLHFHDCFVNGCDGSVLLNSTPNNQAEKDSLPNLTLRGFGFIDAIKSLVEAECPGVVSCADILALTARDSVHAIGGPFWNVPTGRRDGLISRAADPLVSLPAPFHNLTVQLTLFGNVGLDANDLVLLSGAHTIGVAHCSSISTRLYNFTGVGDTDPTLDSNYATNLKSLKCKNINDNTTLVEMDPGSRDTFDLGYYKQVVKRRGLFHSDAALLSSSTTRSIITKQLQSTEGFFAEFAKSIEKMGRINLKLGTEGEIRKHCARVNN* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0968 325 CDD secretory_peroxidase 24 323 IPR033905 GO:0004601|GO:0042744
Vra2g0968 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Vra2g0968 325 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g0968 325 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g0968 325 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g0968 325 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g0968 325 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g0968 325 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g0968 325 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g0968 325 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g0968 325 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g0968 325 Gene3D Peroxidase, domain 2 161 303 - -
Vra2g0968 325 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Vra2g0968 325 Gene3D - 28 324 - -
Vra2g0968 325 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra2g0968 325 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra2g0968 325 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra2g0968 325 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra2g0968 325 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra2g0968 325 Pfam Peroxidase 45 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra2g0968 325 PANTHER PEROXIDASE 25-RELATED 3 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra2g0968 325 PANTHER PEROXIDASE 3 324 - -
Vra2g0968 325 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra2g0968 325 SUPERFAMILY Heme-dependent peroxidases 24 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0968 Vra-Chr2 9920063 9922331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0968 14 324 Peroxidase AT1G05260 64.744 1.25e-151 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0968 K00430 - gmx:547504 569.311