Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0944 ATGGAAAAACAGAAAATGGGTGTGTTAAGAGCTGCAATTGGAGATGCAATTCTGACATCAATGTGGGTTTTCATCATCTCAACTTTGAGAATTGCTTCAACTGAGGTAGCACTTTTCCTCAGCCTCCAACCCTTTTCAGTTGCAGGTCTCTTCATCACCACAATCTTGAACACTCTCTATGTGCTCACCATAAGCTTCATTGGAAGTGTGTTAGGTGGTGCAAGCTTCAACCCTTCAACCACAGTTTCATTCTACACTGCAGGTCTCAGACCTGACTCATCTCTTGCATCAATGGCTGTTAGGTTCCCTGCTCAGGCATTTGGTGGGGCTGTTGGAGTCAAGGCTCTTCTTCTTGTTATGCCATCACAGTACAAGCAGATGCTGAAAGGTCCTTTTTTGAAGGTGGACTTGCACACTGGTGCCTTTGCTGAGGGGCTCTTGACCTTCACTCATAACATGGCTATTCTCTTTGTGATGCTGAGGGGTCCCAAGAACCCTTTTTTGAAGGTGTATTTGCTTTCTGTTGCTACTGCTGCTTTGGTTATCCCTGGTGCTGGGTTCACTGGCCCTTCCATGAACCCTGCCAATGCCTTTGGATGGGCCTTTGTCAACAACAAGCACAACACTTGGGAACAGTTTTATGTCTATTGGGTATGCCCTTTCGTAGGAGCATCCTCTGCTGCTTTCATCTTCAAGTCTATATTTATGGCACCAATCAAGCACAAGAAGGCTTGA 735 0.4585 MEKQKMGVLRAAIGDAILTSMWVFIISTLRIASTEVALFLSLQPFSVAGLFITTILNTLYVLTISFIGSVLGGASFNPSTTVSFYTAGLRPDSSLASMAVRFPAQAFGGAVGVKALLLVMPSQYKQMLKGPFLKVDLHTGAFAEGLLTFTHNMAILFVMLRGPKNPFLKVYLLSVATAALVIPGAGFTGPSMNPANAFGWAFVNNKHNTWEQFYVYWVCPFVGASSAAFIFKSIFMAPIKHKKA* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0944 244 PRINTS Major intrinsic protein family signature 10 29 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vra2g0944 244 PRINTS Major intrinsic protein family signature 57 81 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vra2g0944 244 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vra2g0944 244 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vra2g0944 244 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vra2g0944 244 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 6 244 - -
Vra2g0944 244 SUPERFAMILY Aquaporin-like 5 239 IPR023271 -
Vra2g0944 244 Gene3D Glycerol uptake facilitator protein. 2 242 IPR023271 -
Vra2g0944 244 Pfam Major intrinsic protein 4 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vra2g0944 244 PANTHER AQUAPORIN SIP1-1 6 244 IPR044222 GO:0015250
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0944 Vra-Chr2 9501210 9502130 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0944 6 235 Major Intrinsic Protein MIP AT3G04090 46.087 7.71e-61 189