Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0904 ATGTCTTCCACAAAGAAAAGTCTTCTCAGAACCGTGTTCACAGCAAACGGAAGCTGTGGTTGCAGCAAATCAAACTCCTCTGAAGTTCATGAACCAACCCCAAAACCCAAAACCTCCAACAACACTCACCAAAAGCCAAACAACCTCAGCAGCATGGCCTCTTCCACCACTTCAATGGAACAAGTAGATGAAGAAGAGTTCACCTCCACCACAGTATCCGAATCCGAGACTTTCCATGATCCCAACAACAACAACAACAACGTTGCACTCAAACGAAGCCCTCTTGTCGACAGTGTGGCCATCGAGAAGGACTCTTCCAACCCGTATCATGATTTCAGACACTCCATGCTCCAAATGATCTTCGAGAAAGAGATCGAGTCAGAGGACGATCTTCAAGATCTTCTGCAATGCTTTCTTCACCTGAATGCACCGTGTCACCACCACATCATCGTGAAAGCCTTCAACGCCATCTGCGAAGAAGCTTTTTCTCGCAAGGTTGGTACCACTCCGGCTGCATCCGAACCTTCTCCCTCTCGCCGGAGCCCCCTTCGAAAGAGCAAGTGA 564 0.4858 MSSTKKSLLRTVFTANGSCGCSKSNSSEVHEPTPKPKTSNNTHQKPNNLSSMASSTTSMEQVDEEEFTSTTVSESETFHDPNNNNNNVALKRSPLVDSVAIEKDSSNPYHDFRHSMLQMIFEKEIESEDDLQDLLQCFLHLNAPCHHHIIVKAFNAICEEAFSRKVGTTPAASEPSPSRRSPLRKSK* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0904 187 ProSiteProfiles OVATE domain profile. 101 160 IPR006458 -
Vra2g0904 187 MobiDBLite consensus disorder prediction 16 91 - -
Vra2g0904 187 MobiDBLite consensus disorder prediction 166 187 - -
Vra2g0904 187 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 165 IPR038933 GO:0045892
Vra2g0904 187 Pfam Transcriptional repressor, ovate 105 160 IPR006458 -
Vra2g0904 187 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 165 - -
Vra2g0904 187 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 99 158 IPR006458 -
Vra2g0904 187 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0904 Vra-Chr2 8952807 8954174 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vra2g0904 Ovate 2.9e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0904 - - gmx:102660065 264.618