Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0892 ATGGGGTTTTTGCTCAAAGAGGTTTTGAGGACTCTGTGCTCAAGGAATCGCTGGTCTTATGCCGTGTTTTGGAAGATCGGTTGCAACAATTCCAAGCTGTTAATCTGGGAAGATCACTACTATGAACCCTTGCCATCTCCTTTCCCTCCACGTACTGTTGGGATGTCTAATTTTCCATACCGAGACGGGGAAGGGTGCTGGTTTTCTTCTGAGTCTCAACTGGGGATTCAGGAGGAGGACAGAGTCGGTGGATTGATTAACAAAATGATGTTGAATAATTCAGTCAGTATTGCTGGAGAAGGGATGGTTGGACGGGCAACATTTACAGGAAACTATCAGTGGATTCTTATGAACAATTTCAGTAGAGATGCATATCCACCAGAGGTATATTCTGAGTTGCATTACCAATTTTCTGCTGGAATGCAGACAGTAGCAGTTATTCCTGTGCTTCCTCATGGGGTTGTTCAATTTGGTTCTTTATTTCCAATAATGGAAGATATTGGATTTGTGAATGATGTGAAGAACTTGATCTTGCAATTGGGATCTGTACCTGGTGCCCTTCTTTCTGAAGATTATTCAGCAAAAGTTTCTAGTGAAAGACTTGGTGTTCCTTTCACTGCTGATACACCTGTCATTACTTCTAAATGCACTCCCTCTGCAGCTAATGGCTCCAACCAACTAACTAATTCTACTATTGCTTCAAGGTCTGTTGCTCCATCACCTCATCCGCCAAGGGGAGAAATGGATAATTACCAGGGTTCTGCATTGACACCTCAAACCTATGACCAAAAGCAAATATTTGATAGCATTTGCCAACCAAAGTCTCATTCAATGGTAAAAACAATGGCCTATAGCCAGCAGAAGAAGACGGTCGTCCATACTGAAGCTAAAGTGATACCTACAAATTTTGATTCATGTATGCAACAGCCTTCTGCATATAATTCTAGATCTGCATTCAATGAATTAGCTGGCTTCAATCAATTAAATCTGAGTTGCAACCTTAACTATATGGAACAACAAACATCAGGTGTTGGAAGACAGAGTCAGGTTAATCGCAACATGAATCCATCAAGTGCCTCAAACATGCCTCAACTGAAAACAGGTGGAGGCAAAATTCTTGAACAGAATCAGAGTTCTGGTGGCGGTTCACTATTTGGAGGAATCCCAATATGTGGTGGGAGTAATCTTTTGAGGACAAATATGATTAACTGCTCTGTTTCAAGTTCTCCCAAAGTACCCACTTCTGAATTTTCAGGAAGTCACAAGATTGAGTTTGGGCTTCAAAATAACAATTCAACAACTGATGCTGGGCTCTGTTCTGTGCCTAATTTCTGTAACCAATCAGTTACCAGTCACATGAATCTAGAAAACTCTGCTCAGAAGAACCTTCCCATTGATTTAAAGCATGCTTGTGATGCTTTCGTTTCAACTGATCAAAGGATACATGATGATTTGCTTCATACCGCACTTAATATTCCGTCTCTTCATCTTGAGGAGAATGAGCCTATGGGTGATCATATCCCTGGTTTTGTTCAAGATTGCCTCAATAAAGATTTTACTAGTATGGTGAAAATGAATGTTAAGCATGAAGAGACCTATACTCAACCTCCATCAGGGGACGATCTCTTTGATGTTTTAGGCGTGGATTTGAAAAGGAAACTACTCAATGGAAACTGGGATAATTTGCTTGCCAGTGATTCAGATGCTAATAGAGAGCGTCTAGATAAAAAGGCAACATGCATGAATATGCCCAGTGTACGTCCTGATAACAGCTATTCAGTTAAGGAAGCAACATCAGACAGCGGGATCTTCTCTGGAACGGGCACTGACCACCTCTTAGATGCTGTTGTTTCAAAAGCTCAATCTGCTCCAAAACAGAGTTCTGATGAAATGTCTTGCAGGACAACATTGACAAGGGTTAGTACTGCCTCGGTTTCCTCTCCTGCCTGCAACCAGGTTCTGTCTGATCATGTCCTGAAGGGATTGTTTGATTTTCCCAAGAACGGGGCTAAAAGAGCTGCTGGGGAAACCAGTTCTCTTAGGTCTGGGTGCAGCAAGGATGATGCTGGAAACTGCTCTCAAATGACTTCCATATATGGTTCTAAGCTTAGTTCATGGGTTGAGAATGGTAATAGTGTGAAACGTGAAAGCAGCGTTTCAACTGGATACTCTAAGAGACCAGAAGAAGTTTGCAAATCAAATAGAAAAAGGCTTAAACCTGGAGAGAATCCTAGACCTCGACCTAAAGATCGCCAAATGATTCAAGATCGTGTTAAAGAATTAAGGGAAATTGTTCCGAACGGAGCAAAATGTAGCATAGATGCACTTCTGGAAAAGACCATCAAGCATATGCTTTTCCTGCAAAGTGTAACAAAGCATGCTGACAAGCTGAAACAGACAGGGGAATCTAAGATTGTTAGTAAAGAAGGTGGGTTGCTATTAAAAGACAACTTTGAAGGAGGGGCAACATGGGCATATGAGGTTGGCTCGCAATCAATGGTTTGTCCAATCATTGTTGAGGATCTTAATCCACCTCGTCAGATGCTAGTAGAGATGCTCTGTGAGGAACGGGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAGGATTAGGATTAACCATCTTGAAGGGAGTTATGGAAGCTCGTAATGACAAGATCTGGGCACGCTTTGCAGTTGAGGCCAACAGGGATGTGACGAGGATGGAAATATTTATGTCACTGGTTCGTCTTTTGGATCAAACAGTGAAGGGTGGTGCATCTTCATCGAATGCAACTGATAACAACATGATGATGTATCATCATTCTTTCCCACAAGCTACCCAGATAGCAGCAACTGGTAGACCTAGTAGTTTACAATGA 2859 0.418 MGFLLKEVLRTLCSRNRWSYAVFWKIGCNNSKLLIWEDHYYEPLPSPFPPRTVGMSNFPYRDGEGCWFSSESQLGIQEEDRVGGLINKMMLNNSVSIAGEGMVGRATFTGNYQWILMNNFSRDAYPPEVYSELHYQFSAGMQTVAVIPVLPHGVVQFGSLFPIMEDIGFVNDVKNLILQLGSVPGALLSEDYSAKVSSERLGVPFTADTPVITSKCTPSAANGSNQLTNSTIASRSVAPSPHPPRGEMDNYQGSALTPQTYDQKQIFDSICQPKSHSMVKTMAYSQQKKTVVHTEAKVIPTNFDSCMQQPSAYNSRSAFNELAGFNQLNLSCNLNYMEQQTSGVGRQSQVNRNMNPSSASNMPQLKTGGGKILEQNQSSGGGSLFGGIPICGGSNLLRTNMINCSVSSSPKVPTSEFSGSHKIEFGLQNNNSTTDAGLCSVPNFCNQSVTSHMNLENSAQKNLPIDLKHACDAFVSTDQRIHDDLLHTALNIPSLHLEENEPMGDHIPGFVQDCLNKDFTSMVKMNVKHEETYTQPPSGDDLFDVLGVDLKRKLLNGNWDNLLASDSDANRERLDKKATCMNMPSVRPDNSYSVKEATSDSGIFSGTGTDHLLDAVVSKAQSAPKQSSDEMSCRTTLTRVSTASVSSPACNQVLSDHVLKGLFDFPKNGAKRAAGETSSLRSGCSKDDAGNCSQMTSIYGSKLSSWVENGNSVKRESSVSTGYSKRPEEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLEKTIKHMLFLQSVTKHADKLKQTGESKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVEANRDVTRMEIFMSLVRLLDQTVKGGASSSNATDNNMMMYHHSFPQATQIAATGRPSSLQ* 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0892 952 MobiDBLite consensus disorder prediction 728 753 - -
Vra2g0892 952 CDD bHLH_AtLHW_like 742 811 - -
Vra2g0892 952 MobiDBLite consensus disorder prediction 217 255 - -
Vra2g0892 952 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 738 787 IPR011598 GO:0046983
Vra2g0892 952 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 952 IPR043561 GO:0003700|GO:0006355
Vra2g0892 952 MobiDBLite consensus disorder prediction 714 753 - -
Vra2g0892 952 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 176 IPR025610 -
Vra2g0892 952 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 952 - -
Vra2g0892 952 MobiDBLite consensus disorder prediction 217 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0892 Vra-Chr2 8806360 8812848 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0892 515 926 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 51.179 5.00e-120 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0892 - - gmx:100786351 1552.73