LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra2g0841	ATGGAGAGTATGCCGCTCACACTCTTCTTGATGGCTATTTTGTTAAATGCTACAACTCTAAGTGGAGTGAAACTTCTTGTTCATGACTACTACGAGGAGAAGTGTCCCATAGCCGAAGACATCGTGAGACATAACGTGGAGGTGGCACTTTTGAACAATCCTCGGAGGAAGGATTCTCTGGAGTCAAGTTTCAGTGGAGCTAACCTTTTCATTCCTGCTCCAAATTCCTCTCTAGAGGTTGTCATAGATAACTTTAAGCAACAAGGCCTTGACATAGAAGACTTGGTAACTTTATCAGGTAACCATACTATAGGAAGAGCAAGATGTCTAAACTTCAGGCAGAGGATATATGAAGCAGAAGATGAATATCACCATGTCAATGATCGCTACAAGCGGTACACAACCTTCAGGAGAATTCTGCGGTTCATTTGCCCTGTTGAGGTTGAGGGAAGGGACAACAAATTTGCACCCCTTGATTTGCAGACCCCAAAAAGGTTTGACAACCAGTATTTTATAAACATTCTTCTTTAA	531	0.42	MESMPLTLFLMAILLNATTLSGVKLLVHDYYEEKCPIAEDIVRHNVEVALLNNPRRKDSLESSFSGANLFIPAPNSSLEVVIDNFKQQGLDIEDLVTLSGNHTIGRARCLNFRQRIYEAEDEYHHVNDRYKRYTTFRRILRFICPVEVEGRDNKFAPLDLQTPKRFDNQYFINILL*	177

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra2g0841	176	Pfam	Peroxidase	56	175	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Vra2g0841	176	SUPERFAMILY	Heme-dependent peroxidases	29	175	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Vra2g0841	176	PANTHER	PEROXIDASE 72-RELATED	9	55	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vra2g0841	176	PANTHER	PEROXIDASE 72-RELATED	56	175	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vra2g0841	176	Gene3D	Peroxidase, domain 2	72	175	-	-
	Vra2g0841	176	ProSiteProfiles	Plant heme peroxidase family profile.	56	176	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Vra2g0841	176	PANTHER	PEROXIDASE 20	56	175	-	-
	Vra2g0841	176	PANTHER	PEROXIDASE 20	9	55	-	-
	Vra2g0841	176	Gene3D	-	56	71	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vra2g0841	Vra-Chr2	7830078	7831336	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vra2g0841	16	175	Peroxidase	AT2G35380	46.821	4.05e-45	147

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra2g0841	K00430		-	gmx:100778051	212.231