Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0836 ATGAGTTTTGAAGGTTTTCTTTCTCTTCAATCAATGCCTGCTACATGCGGCTTCTTCTTCTTCGCCTTCACCCTTCTCTTTTCTTTCTTCTCCCTTTTGCTTTTCATCAACAGGATGAAGCCATGGTGTAACTGCTACATCTGCAAGAGTTACTTGACCGTCAGCTGGGCCACAAAGTTCACCAACCTCTGCGACTGGTACACGCATCTTCTCCGGAAATCCCCATCGGCCACCATCCATGTGCATGTCTTGGGGAACACCATAACCGCCAACCCAGACAACGTCGAGCACATTCTCAAGACCAATTTCGAAAACTACCCCAAAGGGAAACCCTTCTCCGCCATCCTCGGAGACCTCCTCGGCCAAGGGATTTTCAACGTCGACGGCGATTCCTGGCTCTTTCAACGCAAAATGGCCAGTCTTGAACTCGGGAGCGTCGCGATTCGCTCCCACGCGATGGAGTCGGTCAACGAGGAGATCCACGCGCGCTTGCTTCCTTTCCTGGTCTCAACCGCGCGTGGCGAAATGAACAAGGAAAAGGTATTGGATTTACAGGACATCCTACGAAGATTTTCGTTCGACAACATCTGCAAAATATCGTTTGGTCTTGACCCGGGTTGTCTCCTTCCAACTCTCCCCGTTTCGGACCTCGCCGACGCGTTTGACCTAGCCTCAAAACTCTCCGCGGAACGCGCCATGACCGCGTCACCGTTCATTTGGAAAGCGAAGCGGCTTTTCGGAGTCGGTTCGGAGAAGAGACTTAAAGAAGCTATCAAGGTCGTAAACGACGTCGCACACAACATGATAAAGGAGAGGAGGGAAATGGGGTTCAACTCGCAGAAAAACCTTCTCTCGCGGTTCATGGGATCCGTTGAAGATGACGCTTACTTAAGAGACATCGTGGTGAGTTTTCTTTTGGCGGGCCGTGACACCGTCGCCTCCGCGTTGACAGGCTTTTTTTCTCTGCTGTCGAAAAGCCCAGAAGTCGAGGCACGGATCCGCGAGGAGGTGGGCCCGGGCCCTGAGCCCCCGACGTTTGATCAGATTCGCGAAATGCATTATCTGAACGCGGCGGTTCACGAGAGCATGAGGCTGTTTCCGCCCATTCAGTTCGACTCCAAGTTCGCCACAGAGGATGACGTGTTGCCAGATGGAACTTTTGTAAGAAAGGGGAGTCGGGTCACTTATCACCCTTACGCCATGGGTCGGATGGAAAACATTTGGGGACCCGATTGCCTCCAATTTCGACCCGAACGGTGGTTACGTGACGGAGTGTTTGTTCCACCGTGTCCTTTTAAATACCCTGTTTTTCAGGCTGGTGTAAGGGTCTGTTTGGGGAAGGATTTGGCTTTGACGGAAATGAAGTCAGTTGTGGTCGCTGTGGTTAGGCAGTTTGAGATTCGGGTTGTTGAACCGGATCAGGAGCCCCAGTTTGTGCCTGGTCTAACAGCCACTTTACGAGGCGGGTTACCGGTTCGGGTTTTAGAAAGGAAATCTTGA 1500 0.52 MSFEGFLSLQSMPATCGFFFFAFTLLFSFFSLLLFINRMKPWCNCYICKSYLTVSWATKFTNLCDWYTHLLRKSPSATIHVHVLGNTITANPDNVEHILKTNFENYPKGKPFSAILGDLLGQGIFNVDGDSWLFQRKMASLELGSVAIRSHAMESVNEEIHARLLPFLVSTARGEMNKEKVLDLQDILRRFSFDNICKISFGLDPGCLLPTLPVSDLADAFDLASKLSAERAMTASPFIWKAKRLFGVGSEKRLKEAIKVVNDVAHNMIKERREMGFNSQKNLLSRFMGSVEDDAYLRDIVVSFLLAGRDTVASALTGFFSLLSKSPEVEARIREEVGPGPEPPTFDQIREMHYLNAAVHESMRLFPPIQFDSKFATEDDVLPDGTFVRKGSRVTYHPYAMGRMENIWGPDCLQFRPERWLRDGVFVPPCPFKYPVFQAGVRVCLGKDLALTEMKSVVVAVVRQFEIRVVEPDQEPQFVPGLTATLRGGLPVRVLERKS* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0836 499 PANTHER CYTOCHROME P450 94C1 18 496 - -
Vra2g0836 499 Pfam Cytochrome P450 86 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0836 499 PANTHER CYTOCHROME P450 18 496 - -
Vra2g0836 499 SUPERFAMILY Cytochrome P450 61 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0836 499 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0836 499 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0836 499 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0836 499 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0836 499 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0836 499 Gene3D Cytochrome P450 53 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0836 499 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0836 499 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0836 499 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0836 499 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0836 Vra-Chr2 7738583 7740338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0836 33 497 Cytochrome P450 AT2G27690 61.555 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0836 K20624 - gmx:100813091 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0836 2 7738583 7740338 Vra2g0836 2 7738583 7740338 ECH