Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0835 ATGTTTGATTGCGTTATGGTCCGAGTTTCCTTGATGGCTTCAGATTCTAGTAATTATTGGAGTACACTTGGTGCTCATAATGAGGATAAGGAGGTATCTAGTTTACAACCCATACAGTTGGATATGGATTCATTAGGCCCTTGTCTTTCCCAAGAGCAACTATTTAGTATCCATGACTTTTCTCCAGAGTGGGCATATACTGGTGTTAGAACAAAGGTTTTAATAGTTGGCACATTTATCGGAAGTAAAAAGCCCTCTAGCGAAACCAAATGGGGATGTATGTTTGGTGAAATTGAGGTTTTTGCTGAAGCTTTAGCAGGTAATGTGATACAGTGTCAGACTCCTTTGCACTCATCTGGCCGTGTACCATTCTATGTTACCTGCAGTAATAGGTTAGCTTGCAGTGAGGTCAGGGAATTTCAGTTTGATGAACATCCAACCAAAATTTTAGGTCCTTTGGGCAGAAGTTGA 471 0.4055 MFDCVMVRVSLMASDSSNYWSTLGAHNEDKEVSSLQPIQLDMDSLGPCLSQEQLFSIHDFSPEWAYTGVRTKVLIVGTFIGSKKPSSETKWGCMFGEIEVFAEALAGNVIQCQTPLHSSGRVPFYVTCSNRLACSEVREFQFDEHPTKILGPLGRS* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0835 156 Pfam IPT/TIG domain 57 135 IPR002909 -
Vra2g0835 156 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 10 147 - -
Vra2g0835 156 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 10 147 - -
Vra2g0835 156 SUPERFAMILY E set domains 57 142 IPR014756 -
Vra2g0835 156 Gene3D Immunoglobulins 50 148 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0835 Vra-Chr2 7689471 7692179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0835 10 142 CAMTA Transcription Factor Family AT2G22300 46.667 2.66e-38 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0835 K21596 - vra:106777573 323.939