Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0792 ATGGAATTCTCTTACCGCAGATTGCTGCTACAGAACGAGGACGTTCCAATCTCCACGTCCATGCCTCCTCTTCCTCACGCCAAACACGTCACAAACGCTTCCTCGCCGCAAGTGTCCTTAGGAAGCCCTCTGGAAGTGTCCATTCGTCCGGTGTTCACTTCGAGCGTTGCCTACGTCTTCCTCATCCTCTTCACCACTTTCTTCTTCATTGGATTCGTGTTTCTCTACTTCCAACAGCACGCCTCCTCCTCGGACACCGATTCCGGCGCCATCCGCCGGCGAGCACAGTCGGATTCCGTGGCGGAGAAGTCTCTGGCCGTGGTGGCGGATGCGGCGAGGCAGGGGGATTGCGCGATATGTCTGGAGGAGGTAGGAGAGGGAGAGGCGGTAAAGATGATTGCGTACTGCAAGCACGTGTTCCACGCGGATTGCATTGATAGGTGGCTGGAGAAGCAGGTGACGTGCCCCGTGTGCCGGTGCTGCTGCGAGAGGTGTGGAGAGGTGGAGTCGGTGACGGTGAGAGGAGACGAAGAAGAAGATCGAGAAGTGGTTTCCGTAACAAGCTTGGATTAG 573 0.5672 MEFSYRRLLLQNEDVPISTSMPPLPHAKHVTNASSPQVSLGSPLEVSIRPVFTSSVAYVFLILFTTFFFIGFVFLYFQQHASSSDTDSGAIRRRAQSDSVAEKSLAVVADAARQGDCAICLEEVGEGEAVKMIAYCKHVFHADCIDRWLEKQVTCPVCRCCCERCGEVESVTVRGDEEEDREVVSVTSLD* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0792 190 SMART ringv_2 116 159 IPR011016 GO:0008270
Vra2g0792 190 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 159 IPR013083 -
Vra2g0792 190 PANTHER RING-H2 FINGER PROTEIN ATL57 30 175 - -
Vra2g0792 190 PANTHER RING FINGER DOMAIN-CONTAINING 30 175 - -
Vra2g0792 190 SUPERFAMILY RING/U-box 116 163 - -
Vra2g0792 190 SMART ring_2 117 158 IPR001841 -
Vra2g0792 190 ProSiteProfiles Zinc finger RING-type profile. 117 159 IPR001841 -
Vra2g0792 190 Pfam Ring finger domain 116 159 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0792 Vra-Chr2 7071674 7072462 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0792 52 179 Rapid Response to Elicitors AT3G05200 34.694 5.19e-20 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0792 - K10664 var:108339852 322.398