Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0761 ATGGGGGGGCTCAGCGTAAGAACCAGCAGCAGCAGCAGGAAAATGAGGGTTGTGGGATGTATTTTAAGGTTGAAGGGTGTGTTGGAAAAGCTTCAAAAGAGCGTCTTGTTGCGGAGACATAAATCAAGTTCCTGTGGAGGAGATTATGAAGAAATAGGAGATGACAGAGGGTGTGTTGCTGAAGATGTGAAAGAAGGGCATTTTGCTGTGATTGCAAAGGATAATATAGGAGAGGAGGCAAAGAGATTGGTGGTTCCGTTGAGCTGTTTAAAGAACGCAACATTCTTGAGGCTGTTGGAGGAAGCAGCAGAAGAATATGGGTTTGATCAACATGGTGCACTAACCATACCTTGCAGGCCTAGTGAACTTGAGATGCTATTGGCTCAACAATGGAAAGAAAGAAGGCGATTCTGA 414 0.4493 MGGLSVRTSSSSRKMRVVGCILRLKGVLEKLQKSVLLRRHKSSSCGGDYEEIGDDRGCVAEDVKEGHFAVIAKDNIGEEAKRLVVPLSCLKNATFLRLLEEAAEEYGFDQHGALTIPCRPSELEMLLAQQWKERRRF* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0761 137 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 27 134 - -
Vra2g0761 137 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 134 IPR003676 GO:0009733
Vra2g0761 137 Pfam Auxin responsive protein 44 127 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0761 Vra-Chr2 6749259 6749999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0761 10 127 Calmodulin-binding Proteins AT3G43120 31.206 7.96e-14 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0761 - K14488 gmx:102667608 160.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0761 2 6749259 6749999 Vra2g0761 2 6749259 6749999 ECH
Vra4g0353 4 6366454 6367285 Vra2g0761 2 6749259 6749999 PCT