Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0748 ATGGCCAATTATACATCTGTGTTCAAGAAAGTAATAAAACAACAGTTGGGTTATTGCGTAGTTGATGTGGACGCTGATTGGAATGGGGCATTCAATTTCAGCAAAGATCTTACCTTTTTGACCATCTGTGCCCAGCAAATGAAAGGAGATATTACACAACGAATGTGCACAGAAGCAGAAATACTAGCTTATGGCCAAAGTTTTGGTGGTGGGAAGTCAAGATCCATCGTCTTGAAGCCCAATATAAATTGTAATTTGAGCTCATGGGTTAATGGTTGTGAACCCGGATGGGGTTGTAAAGCTAATCAGAAAGTAGACATTGACAGTCCCAAGAAAGATATTCCTATTAGATCTGTAGATTGCCTACCTTGTTGTGAAGGGTTCTTTTGCCCTCGTGGTCTCACTTGCATGATACCTTGCCCATTGGGGTCTTATTGTCCTCTTGGAAACCTCAATAAGACTAGTGGAGTATGTGAACCATATCGTTATCAGCTACCTCCTGGAAAGCCTAACCATACTTGTGGTGGGGCAGATATCTGGGCAGATATTCAGAGTAGCAGTGAGGTATTCTGCTCACCAGGGTCGTTTTGTCCCTCTACAATTGTAAAAAATCCTTGCAATAAAGGGTATTATTGCAGAACAGGTTCTACTTCTCCAGAGCGGTGTTTCAAATTGGCAACTTGTGAGCCTAATTCAGCGAATCAAAATATTACTGCATATGGTGTCTTGATTTTTGCTGGCTTGTGTTTTTTGCTTATTATCATATACAATTGTTCTGATCAAGTTCTTGCAACTCGAGAAAGAAGACAAGCAAGTACAAGAGAGAGGGCTGTTCAAAGTGTGAGAGAAACCCAAGCCCGTGAAAAATGGAAATCTGCGAAAGATATTGCTAAAAAGCATGCAGTGGGACTACAATCGCAACTATCACGTACATTTTCACGCAAAACTTCAAAGAAGCCAGAGTTGAAAGGTTTTGGTTCTAAACATTCAGATTCTGCTATTCCACCTAAAGGCAAGAAAAAGGATAAAAACAATCTCTCAAAAATACTAAATGATATTGAGCAAAACCCTGATAATCCAGAGGGGTTTAATGTTGAGATAGGAGATAAAAATGTGAAAAAGCAAGCACCAAGGGGCAAACAATTACATACTCAAAGTCAAATTTTCAAGTATGCATATGGTCAGATTGAAAAAGAAAAGGCTTTAGCAGAACAAAACAAAAACTTAACCTTTTCTGGAGTAATTTCAATGGCTAGTGATATTGAGATCAGGAAGAGACCTACTATTGAAGTTGCTTTTAAAGATTTAACCCTCACTTTGAAAGGGAAAAACAAACATTTATTGAGATGTGTAACCGGTAAACTATATCCTGGTAGAGTTTCAGCTGTCATGGGCCCATCTGGGGCTGGCAAAACAACATTTCTTTCTGCTTTAACTGGAAAAGCAACTGGATGTCACACGACTGGGCAAGTTCATGTAAATGGTCAGGAATCTTCTATCAGGTCATACAAGAAAATCATTGGGTTTGTGCCACAAGATGATATTGTGCATGGAAATTTGACAGTGGAGGAGAATTTATGGTTCAGTGCTAGATGCAGACTCCCTGCCGATCTACCAAAAGAAGAAAAGGTGTTAGTGGTTGAAAGAGTCATTGAGTCATTAGGTCTACAGGCAATACGAGATTCTTTAGTCGGAACAGTGGAGAAACGAGGAATCTCTGGAGGTCAAAGGAAAAGAGTAAACGTTGGATTGGAAATGGTCATGGAACCTTCCCTTCTAATTTTGGATGAACCCACATCTGGTTTGGATAGCTCATCTTCTCAATTGCTTCTAAGAGCACTTAGACGTGAAGCTCTTGAAGGTGTGAACATATGTATGGTCCTTCACCAACCGAGTTACACCTTGTTCAAGATGTTTGACGATTTTATACTACTTGCAAAAGGAGGTCTTACAGTGTATCATGGACCAGTGAACAAAGTGGAAGAGTATTTCTCAAGCATGGGCATCAATGTCCCTGACCGTGTCAACCCTCCAGATTACTTCATTGACATTTTAGAAGGAATAGTAAAATTAAGCCCAAGCTTAGGAGTGACCTATAAACAACTACCTGTGAGATGGATGCTTCACAATGGGTACCCCGTGCCCATGGATATGCTACAGAGTGTTGAAGGAATGTCCGCCCCAAGTGGTGAAGGCTCATCAAGTGGAGCAGCAACTGGTGGAGAAGAACAAGCACCCTCTTTTGCTGGAGAACTTTGGCAGGATGTAAAGTGCAATGTTGAGATGAAGAAGGATATCCTTCACATTAACTTCTTAGCTTCACATGATCTGTCCAATCGGGTTACACCAGGAGTGTTCAACCAATACAAGTACTTTCTTGGAAGAGTGGGTAAGCAAAGACTAAGAGAAGCTAGAACACAGGCTGTGGATTTCTTGATTTTGCTACTAGCTGGCCTTTGCTTAGGTACACTTGCCAAAGTGAGTGATGAGTCATTTGGAGCAACTGGTTACACATACACTGTGATAGCAGTATCACTCCTTTCTAAGATTGCGGCTTTGAGATCATTCTCATTGGATAAGTTGCACTATTGGCGGGAAAGTTCTTCAGGCATGAGCAGTTTGGCTTACTTTCTATCAAAGGATACTGTTGACCATTTTAGCACAATTATCAAGCCACTAGTTTACCTTTCCATGTTCTATTTCTTCAACAATCCAAGATCATCAGTCGTAGATAACTATATTGTTCTACTATGTTTAGTCTATTGTGTCACTGGCATAGCTTATGTGTTAGCAATCTTCTTACAGCCAGGTCCAGCCCAACTGTGGTCAGCTTTACTTCCAGTAGTTTTGACTCTTGTAGCAACCTATCAAAACGAAGATGATAGCAAATATGTTAAATATCTGTCAGATTTGTGCTACACCAAGTGGGCTCTTGAAGCATTTGTAATATCAAATGCTAAAAGATATGCTGGAGTTTGGTTAATAAGTCGATGTGGTGCTCTTTATTCTTCTGGGTATGATCTTAAACATTGGTATCAATGCTTAGGCCTTCTTATCGTGATGGGAATAATTAGTCGCATGCTGGCATTCTTCTGCATGATAACCTTCCAAAAGAAATAA 3120 0.4026 MANYTSVFKKVIKQQLGYCVVDVDADWNGAFNFSKDLTFLTICAQQMKGDITQRMCTEAEILAYGQSFGGGKSRSIVLKPNINCNLSSWVNGCEPGWGCKANQKVDIDSPKKDIPIRSVDCLPCCEGFFCPRGLTCMIPCPLGSYCPLGNLNKTSGVCEPYRYQLPPGKPNHTCGGADIWADIQSSSEVFCSPGSFCPSTIVKNPCNKGYYCRTGSTSPERCFKLATCEPNSANQNITAYGVLIFAGLCFLLIIIYNCSDQVLATRERRQASTRERAVQSVRETQAREKWKSAKDIAKKHAVGLQSQLSRTFSRKTSKKPELKGFGSKHSDSAIPPKGKKKDKNNLSKILNDIEQNPDNPEGFNVEIGDKNVKKQAPRGKQLHTQSQIFKYAYGQIEKEKALAEQNKNLTFSGVISMASDIEIRKRPTIEVAFKDLTLTLKGKNKHLLRCVTGKLYPGRVSAVMGPSGAGKTTFLSALTGKATGCHTTGQVHVNGQESSIRSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLPADLPKEEKVLVVERVIESLGLQAIRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFKMFDDFILLAKGGLTVYHGPVNKVEEYFSSMGINVPDRVNPPDYFIDILEGIVKLSPSLGVTYKQLPVRWMLHNGYPVPMDMLQSVEGMSAPSGEGSSSGAATGGEEQAPSFAGELWQDVKCNVEMKKDILHINFLASHDLSNRVTPGVFNQYKYFLGRVGKQRLREARTQAVDFLILLLAGLCLGTLAKVSDESFGATGYTYTVIAVSLLSKIAALRSFSLDKLHYWRESSSGMSSLAYFLSKDTVDHFSTIIKPLVYLSMFYFFNNPRSSVVDNYIVLLCLVYCVTGIAYVLAIFLQPGPAQLWSALLPVVLTLVATYQNEDDSKYVKYLSDLCYTKWALEAFVISNAKRYAGVWLISRCGALYSSGYDLKHWYQCLGLLIVMGIISRMLAFFCMITFQKK* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0748 1039 PANTHER ABC TRANSPORTER G FAMILY MEMBER 24 5 1036 - -
Vra2g0748 1039 Pfam ABC-2 type transporter 629 1039 IPR043926 GO:0140359
Vra2g0748 1039 MobiDBLite consensus disorder prediction 307 344 - -
Vra2g0748 1039 MobiDBLite consensus disorder prediction 723 743 - -
Vra2g0748 1039 CDD ABCG_EPDR 429 655 - -
Vra2g0748 1039 ProSitePatterns ABC transporters family signature. 572 586 IPR017871 GO:0005524
Vra2g0748 1039 MobiDBLite consensus disorder prediction 726 741 - -
Vra2g0748 1039 SMART AAA_5 457 658 IPR003593 -
Vra2g0748 1039 Pfam ABC transporter 451 600 IPR003439 GO:0005524
Vra2g0748 1039 Gene3D - 420 671 IPR027417 -
Vra2g0748 1039 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 5 1036 - -
Vra2g0748 1039 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 432 668 IPR027417 -
Vra2g0748 1039 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 431 672 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0748 Vra-Chr2 6572526 6578541 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0748 458 653 Calmodulin-binding Proteins AT2G36910 27.442 1.33e-10 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0748 - - gmx:100809312 1886.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0748 2 6572526 6578541 Vra2g0748 2 6572526 6578541 ECH