Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0743 ATGGAAAGTCTTGTACTTGTCCACAAAATTATGCTTCATCTGTGGTTTGCTGCTTGGATTTGCTTAGGTGTGTGCTCTGCTTACAACCAAAACAATTGTACTTCAAATGAAATTGGGCTAGGAACAAGGTACAGCTGCAAGTCAAAGCAGGATTCATGCGAAACATTCTTGGTGTATAGAGCTAACAAAAATTTCAACACCATTTCTAGTGTCTCAAAGCTCTTCAACAAGAGCTCTGATGAGGTGCTTCTAAAGAACAACCTCGTATCTTCCTCTTTGTCTCTTGTACTCAGACAAGGTAAGGAGGTGCTTATTCCTGTTAATTGTACCTGCTCTGGCACGTATTATCAAACCAGTTTAAGCTATAAGGTCCTTGACAACACAACATTTTCCGAGGTTGCTTGTGGTGTTTTTGAAGGGCTGCTAAGTCGTCTCACACTTGCTGAGGAAAACCTCTCACAAGGTAATGAACCAGAAGCTGGTTCTGAGCTTCATGTACCTCTCATGTGTGTTTGTCCTGACAGTGAGAATTCCACCTGGAGCAAGAAGGTGAAGTACCTTGTCACGTACCCTCTTATAGCAGAAGATGATCCTGACAAAGTGAGTCAGAAATTTCAAATCTCACCAGAAGAGTTTTATGCAGTCAATAACTTGAATTCCTTGTCAACTGTTTATCCTAACACAGTTGTTCTAGTTCCAATAGAGGATGGTCCAATCAGAATACTTGATATTCCTGACTCTCCTTCTCCACCTCCAGGTTTTCTTCCTACAAATCCAGTGAACAAGACACAACAATACACAAAACCATCACATTTGTACATTGCAGGGTGTGTTATCGGATTTTTGTTGCTCATAACATTGCTTGCTAGCGGATTTTACATAAAGAGATTAAGAAAAATTGAAGTTGTTCATTCCTTCATTCCCACCAACTCCCTCACTTTGTGGTCGCCAACTAGAAGCTCCCAGATATCCACACAAACGGGTAAAAGCAATACAACTTGGTGCCTGTCCCCGGATCTTCTTGTTGGAATAAAGTACTACTTACTCAATTACACCATAGAGGAGCTCCAGAAGGGAACCAAGAATTTCAGTCAAGAAAACAACATCAGTAGCGAAGGTGACTTTGTCTATAAGGGCAGAGTCAACGATGTTGAGGTGATGGTGAAGAGGATGAGGTTGGAAGATACACGAAAGGTGATTGATTTACATTCTAAGATCAACCACATTAATATTGTGAACTTGCTTGGTGTTTGTTATGGTGAGAGCAATGATTCATGGTCTTATTTAGTGTTTGAGTTCCCTAAGAATGGATGCTTGAGGGACTGCTTATCTGATCGATGCAATCCTCTAAACTGGTACAAACGGACACAAATTGCCTTTGATATTGCGACATGTCTCTACTATTTACATTTCTGTTCTTTTCCTTCCTATGCTCACATGAATGTCAGTAGCAGAAACATATTCATAACAGCTGAATGTAGGGGTAAACTGGCAGATGTTGGAAGGGCATTGGCTGGCAGTGCCACAGTCAGCAAAAGCAATGATAGTGTCGAGATTCCCAAAGGATTGGTGGCACCAGAGTTCCTCTCACATGGCTCAGTTTCTGAAAAAGTTGACATTTTTGCATTTGGGGTTGTATTGCTTGAGCTGATCTCAGGAAGGGAGAATTTTGATGGAAAAGCAATGAAAGATTCCCTGGGATTCTTGTTGGGGGAGGCCAGTGAAGGTGGTTGTTTTGAAGGGTTATGGAGTTTCATGGATCCTAATCTGAAGGATTACTCTCTTCCAGAGGCTTTATGTTTATCTTTTCTGGCAAAGGATTGTGTGGCAGATGATCCCCTGCATAGGCCAAGTATGGATGATATCATGAAAGTCCTTGCAAAAATGGTTTAG 1893 0.4136 MESLVLVHKIMLHLWFAAWICLGVCSAYNQNNCTSNEIGLGTRYSCKSKQDSCETFLVYRANKNFNTISSVSKLFNKSSDEVLLKNNLVSSSLSLVLRQGKEVLIPVNCTCSGTYYQTSLSYKVLDNTTFSEVACGVFEGLLSRLTLAEENLSQGNEPEAGSELHVPLMCVCPDSENSTWSKKVKYLVTYPLIAEDDPDKVSQKFQISPEEFYAVNNLNSLSTVYPNTVVLVPIEDGPIRILDIPDSPSPPPGFLPTNPVNKTQQYTKPSHLYIAGCVIGFLLLITLLASGFYIKRLRKIEVVHSFIPTNSLTLWSPTRSSQISTQTGKSNTTWCLSPDLLVGIKYYLLNYTIEELQKGTKNFSQENNISSEGDFVYKGRVNDVEVMVKRMRLEDTRKVIDLHSKINHINIVNLLGVCYGESNDSWSYLVFEFPKNGCLRDCLSDRCNPLNWYKRTQIAFDIATCLYYLHFCSFPSYAHMNVSSRNIFITAECRGKLADVGRALAGSATVSKSNDSVEIPKGLVAPEFLSHGSVSEKVDIFAFGVVLLELISGRENFDGKAMKDSLGFLLGEASEGGCFEGLWSFMDPNLKDYSLPEALCLSFLAKDCVADDPLHRPSMDDIMKVLAKMV* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0743 630 Pfam Protein tyrosine and serine/threonine kinase 382 564 IPR001245 GO:0004672|GO:0006468
Vra2g0743 630 ProSiteProfiles LysM domain profile. 188 232 IPR018392 -
Vra2g0743 630 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 14 629 - -
Vra2g0743 630 Gene3D Phosphorylase Kinase; domain 1 344 433 - -
Vra2g0743 630 ProSiteProfiles Protein kinase domain profile. 350 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra2g0743 630 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 14 629 - -
Vra2g0743 630 Gene3D Transferase(Phosphotransferase) domain 1 435 630 - -
Vra2g0743 630 SUPERFAMILY Protein kinase-like (PK-like) 347 626 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0743 Vra-Chr2 6523095 6525475 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0743 44 630 Receptor kinase-like Gene Family AT2G23770 28.808 2.44e-64 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vra2g0743 PK_Tyr_Ser-Thr 4.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0743 - - gmx:100818937 988.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0743 2 6523095 6525475 Vra2g0743 2 6523095 6525475 ECH