Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0644 ATGCCGAGAAAAGGAATGAGAAGCATTTTCTTCAGGCCTTCATCTTCTCCTTCATCCTCCACCTCATCACAACCACCTCCCTCCCCTCTCCGCACATTTTCAGACTCCTTAATGGAACAGAACATACAAATCGCAGAGGCTCTCGTGACCAAATGGGACGATTCCAAACTCGGAACGCCGCTTTTCAGCGGCACGCGCCAGGAAGCCAGAAAGTACCTTGACGCTGTAAAGGGACTACAATCCGCTATGCAGTACTTCGTCGCACAGGATTCCACCTCCGCCACTCTTGTGCGCGCTCAGTTCCTCATGCAGCTCGCCATGAAGACGCTTCAGAGAGAGTTTTACCAGATTCTTTCCTCCAACAGAGACCACCTGGATCCTGAAACTGTCTCCGCGCGCTCCTCCATTGATCTCCGCAGCAGCGTCTCTGAGTACGTTTCCGATTATGACGACGAAATCACAGCCTCCGAGGATGACTTCCGCATCTCCGAGACCGAGCGTGTGTCAATGCTCGCCATGGAGGATTTGAAAGCCATTGCGGATTGCATGATTTCCTCCGGCTACGGGAAAGAGTGCGTCAGCGTTTACATCCTCATGAGAAAATCTATTGTCGACGAAGCGCTGTACCATCTCGGAGTGGAAAAATTAAGCCTCGCTCGGGTTCAGAAACTAGACTGGGAGGTTCTCGAGTTGAAGATCAAGAAATGGTTGAACGCTGTTAAAGTCGCCGTTGGAACTCTCTTCCACGGCGAGAGAATCCTCGCTGACCACGTCTTCTCCTCGAATCCCGAAAAGAGGATCTCGGAATCCTGTTTCGCTGAAATCACCAAAGACGGCGCCGTTTCGCTGTTCGGATTCCCCGAAATGGTGGCGAAGTGCAAGAAATCGCCGGAGAAAATGTTCAGGACGTTGGATTTATACGAAGCGATCTCTGACCGGTGGACTCGGATCGAATCCATATTCTCTTTCGAATCCACGTCTGCCATTCGCTTACAGGCCATTACGTCCATGGTGAAACTCGGAGAAGCCGTTAGAACGATGCTAACGGACTTCGAAACCGCGATTCAGAAGGACTCCTCCAAGACAACGGTCCCTGGCGGTGGGGTCCACCCTCTCACGCGCTACGTGATGAACTACCTAACTTTCCTCGCCGATTACAGCGGGGTGTTGGTTGATATAATCCCTGATTTGCCGCAATCGCCGTTGCCGGAGTCTTACTACCGTAGCCCGATGCGCGACGAAAACCCGCCAGCGTCGGAGTTATCCGAGAAAATCGCGTGGCTTATCCTCGTTGTGCTGTGCAAGCTCGACGGCAAAGCGGAATTCTACAAGAGCGTAGAGCTTTCATACCTGTTTCTGGCTAACAACATGCAATACGTCGTGAGTAAGGTGCGTAGATCGAACCTGGGGTTCCTTCTCGGAGAGGAGTGGTTGGCGAAGCACGAATCGAAGGTTACTGAGTACGCGTCCAAGTACGAGCGCGTCGGGTGGAGCAAGGTGTTCGCGTCGTTACCGGAAAATCCAGCGGCGGAGGTGAAGGTGGAGCAGGCAAGGACCCACTTCATGAAGTTCGACGCTGCGTTTCATGAAACGTGCAGAAAACAGTCGTCGTGGGTGGTATCCGACCCGAAACTGAGAGACGAAATCAAAGGCTCGATAGGTTCGAAGCTGATGCAAAAGTACAGCGAATTTTACGAGAAGAATCGGGTCGGGTCAAAGTCCGTTCGGTTTATTTTGCCCGAAGATATTGGGAAAAATTTGTCCAACATTTTGTGCGGGAATGGAGATTTGGACAGTGTCTCCTCACATTCTTCGTCAACAACGTCGTCTTCTCATCGCTCTAGTCGGCGGTGA 1854 0.5189 MPRKGMRSIFFRPSSSPSSSTSSQPPPSPLRTFSDSLMEQNIQIAEALVTKWDDSKLGTPLFSGTRQEARKYLDAVKGLQSAMQYFVAQDSTSATLVRAQFLMQLAMKTLQREFYQILSSNRDHLDPETVSARSSIDLRSSVSEYVSDYDDEITASEDDFRISETERVSMLAMEDLKAIADCMISSGYGKECVSVYILMRKSIVDEALYHLGVEKLSLARVQKLDWEVLELKIKKWLNAVKVAVGTLFHGERILADHVFSSNPEKRISESCFAEITKDGAVSLFGFPEMVAKCKKSPEKMFRTLDLYEAISDRWTRIESIFSFESTSAIRLQAITSMVKLGEAVRTMLTDFETAIQKDSSKTTVPGGGVHPLTRYVMNYLTFLADYSGVLVDIIPDLPQSPLPESYYRSPMRDENPPASELSEKIAWLILVVLCKLDGKAEFYKSVELSYLFLANNMQYVVSKVRRSNLGFLLGEEWLAKHESKVTEYASKYERVGWSKVFASLPENPAAEVKVEQARTHFMKFDAAFHETCRKQSSWVVSDPKLRDEIKGSIGSKLMQKYSEFYEKNRVGSKSVRFILPEDIGKNLSNILCGNGDLDSVSSHSSSTTSSSHRSSRR* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0644 617 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 25 598 - -
Vra2g0644 617 PANTHER EXOCYST COMPLEX PROTEIN EXO70 25 598 IPR004140 GO:0000145|GO:0006887
Vra2g0644 617 MobiDBLite consensus disorder prediction 1 31 - -
Vra2g0644 617 MobiDBLite consensus disorder prediction 11 31 - -
Vra2g0644 617 Gene3D Exocyst complex component Exo70 54 596 - -
Vra2g0644 617 SUPERFAMILY Cullin repeat-like 60 571 IPR016159 -
Vra2g0644 617 Pfam Exo70 exocyst complex subunit 234 575 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0644 Vra-Chr2 5157417 5159940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0644 22 594 EXO70 exocyst subunit family AT5G59730 48.675 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0644 K07195 - gmx:100810579 948.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0644 2 5157417 5159940 Vra2g0644 2 5157417 5159940 ECH