Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0638 ATGTTTAGGGATGCCCGAATTGCAGGGGAGCGCCCTTATTGGATGGGCGAAATNATTTGGAACTCTTTGCTTGCACATTGGAATTCAGTAGAGTTTCGCAAGAAGAGTGCTACAGCCCAGAGGAATAGAGCGTCTGAAAAGGGTGGTGCCTTGCATACTAGCGGGTCGATCACAATTCACGAGCATGCCATTCGTATGCAGGAAGAATTTTCTACAAGACTTTCACAAGTTAGATCCGAACATGGGTCAGCTCCTACACCGGATGATGCGAGTAATGCAGATGACGACATCCGTAGCACACAATGCTGGGTCGATGTTGATTTTTTCACAGCAGCTACTGACACAACTGCTTTATCAGTAGAGTGGGCAATAGCAGAAGTGTTGAACAATCCAAAGGTGCTGCAGAAAGCTGAAGAGGAGGTGGAGAGAGTGACTGGAAACAAGAGATTAGTGTGTGAAACAGACAGTGAAAAGCTTCCTTATATCCATGGCATCATAAAAGAAACAATGAGGCTTCATCCACCAATACCAATGCTTATGAGAAGGGGAATCAAAGACTGTGTGGTTAATGGAAACATGATTCCAAAGGGTTCAATAGTTTGCCTAAACATTTGGGCTATGGGAAGGGATCCAAGTATCTGGGAGAACCCTTTGGAGTTTAAACCAGAAAGGTTTGTAGAAGGTGAAGGGAAAGATATTGATCTGAAAGGGCACCATTTTGAGTTGTTGCCATTTGGCAGTGGAAGAAGAGGGTGTCCTGGTATGCCTTTGGCCATGCGTGAATTGCCTACAATCATTGGAACACTGGTGCAGTGTTTTCAGTGGAAGATTTTTGGTTCTCAAGGTGAAATCTTGGAGCATGGAAGAGGCAAAATCAACATGGATGAACGACCAGGCTTGACTGCTCCAAGGGCTAATGATCTTATATGCATCCCTGTTGCACGATTAGATCCTACTCCTTTTCTTCAACTCTAG 975 0.4462 MFRDARIAGERPYWMGEXIWNSLLAHWNSVEFRKKSATAQRNRASEKGGALHTSGSITIHEHAIRMQEEFSTRLSQVRSEHGSAPTPDDASNADDDIRSTQCWVDVDFFTAATDTTALSVEWAIAEVLNNPKVLQKAEEEVERVTGNKRLVCETDSEKLPYIHGIIKETMRLHPPIPMLMRRGIKDCVVNGNMIPKGSIVCLNIWAMGRDPSIWENPLEFKPERFVEGEGKDIDLKGHHFELLPFGSGRRGCPGMPLAMRELPTIIGTLVQCFQWKIFGSQGEILEHGRGKINMDERPGLTAPRANDLICIPVARLDPTPFLQL* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0638 324 Pfam Cytochrome P450 107 281 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0638 324 Pfam Plant transposase (Ptta/En/Spm family) 17 69 IPR004252 -
Vra2g0638 324 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 106 319 - -
Vra2g0638 324 MobiDBLite consensus disorder prediction 71 95 - -
Vra2g0638 324 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 245 254 IPR017972 GO:0005506|GO:0016705
Vra2g0638 324 PANTHER CYTOCHROME P450 FAMILY FLAVONE SYNTHASE 106 319 - -
Vra2g0638 324 Gene3D Cytochrome P450 58 294 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0638 324 PRINTS P450 superfamily signature 111 128 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0638 324 PRINTS P450 superfamily signature 164 175 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0638 324 PRINTS P450 superfamily signature 243 252 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0638 324 PRINTS P450 superfamily signature 252 263 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0638 324 PRINTS E-class P450 group IV signature 159 175 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0638 324 PRINTS E-class P450 group IV signature 208 226 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0638 324 PRINTS E-class P450 group IV signature 236 252 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0638 324 PRINTS E-class P450 group IV signature 252 270 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra2g0638 324 MobiDBLite consensus disorder prediction 71 86 - -
Vra2g0638 324 SUPERFAMILY Cytochrome P450 104 315 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0638 Vra-Chr2 5091433 5105488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0638 106 315 Cytochrome P450 AT2G45550 47.393 2.76e-64 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0638 - K23179 vra:106778701 660.988