Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0613 ATGGCGAATACACTCATTTCGTCTCCTTCGTTCCTCGGCACGCCTCTTCCCTCGCTCCAACACCACCACCGCACCACTACCAGGCTTGTCGCCACCAAGGTCCACGTCAACCTCCACCAAATCCCCCCTCTCCACTCCATAAGCCACTCCATCGACTTCGTCGGTATCGCCACCAGAGCTGAAGGCCTTCTTTACACTCTCGCTGATGCTGCGGTTGCGGCGGACCCGGCTGCTCCCGCCACTGATGCTGCGGTGCAGAAGAACGGAGGCTGGTTCGGCTTCATCTCCGAAGCCATGGAGGCTATTCTCAAGGTGTTGAAGGATGGCCTTTCTGCTGTGCATGTGCCTTATACATATGGATTTGCTATCATATTACTCACTGTTATAGTTAAGGCTGCCACACTTCCCTTGACAAAGCAACAGGTTGAATCTACATTGGCTATGCAAAATCTTCAACCAAAAATTAAGGCTATTCAAGAAAGATATGCTGGCAATCAGGAAAGAATACAACTTGAGACATCAAGGCTATATCGGCAGGCTGGGGTTAATCCATTGGCAGGTTGTTTACCTACTTTGGCCACAATTCCAGTCTGGATTGGTCTCTACCAAGCATTGTCAAATGTGGCAAATGAGGGACTATTAACCGAGGGTTTCTTTTGGATACCTTCTTTGGCTGGTCCTACTACCATTGCTGCTAGGCAAAGTGGAGCTGGAATTTCTTGGCTTTTTCCCTTTGTGGATGGGCATCCACCTTTGGGTTGGCAAGATACTGCAGCATATCTTGTTTTACCCATTCTTCTTGTTGTTTCTCAATATGTTTCAATGGAAATCATGAAACCACCTGAGACAGATCCTTCTCAAAAGAATCAACTTCTTATTTTAAAGTTTCTTCCACTCATGATCGGCTACTTCTCACTATCTGTCCCATCAGGATTAACAATTTACTGGTTTATAAACAATGTCCTGAGCACAGCTCAACAAGTATGGTTGCGCAAATTGGGGGGTGCAAAGCCTGTTGTGAATGAAAATGCCAGTGGGATTATTACTGCAGGACGAGCTAAAAGATCTGACTTGCAGCCGGCAAAAGGCGGTGAAAGGTTTAAGCAGTTAAAAGAAGAGGAAAAGAAGAAAAAGTTAAGCAAGGCACTGCCTGTGGAAGATGTTCAGCCTCTGGCATCTGTTTCTGCTTCTGATGATGGCTCGGACATAGATAGTGATGGCAAGGAACCAGAAGTTGCAGAAGGAGCCTATGCTTCCAAAGTTGGTGAAGAGGCTCAAATTAATTCTAGGGAAAGAAGAAGCAAGCGTTCGAAGCGGAAGCGTGCTGTATAA 1332 0.4655 MANTLISSPSFLGTPLPSLQHHHRTTTRLVATKVHVNLHQIPPLHSISHSIDFVGIATRAEGLLYTLADAAVAADPAAPATDAAVQKNGGWFGFISEAMEAILKVLKDGLSAVHVPYTYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLAGPTTIAARQSGAGISWLFPFVDGHPPLGWQDTAAYLVLPILLVVSQYVSMEIMKPPETDPSQKNQLLILKFLPLMIGYFSLSVPSGLTIYWFINNVLSTAQQVWLRKLGGAKPVVNENASGIITAGRAKRSDLQPAKGGERFKQLKEEEKKKKLSKALPVEDVQPLASVSASDDGSDIDSDGKEPEVAEGAYASKVGEEAQINSRERRSKRSKRKRAV* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0613 443 PANTHER OXA1 1 437 IPR001708 GO:0016021|GO:0032977
Vra2g0613 443 MobiDBLite consensus disorder prediction 389 443 - -
Vra2g0613 443 PANTHER INNER MEMBRANE PROTEIN ALBINO3, CHLOROPLASTIC 1 437 - -
Vra2g0613 443 Pfam 60Kd inner membrane protein 119 332 IPR001708 GO:0016021|GO:0032977
Vra2g0613 443 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 118 331 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0613 Vra-Chr2 4847250 4853572 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0613 16 388 Chloroplast and Mitochondria Gene Families AT2G28800 67.733 2.03e-179 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0613 K03217 - gmx:100813782 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0613 2 4847250 4853572 Vra2g0613 2 4847250 4853572 ECH