Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0583 ATGAGTTTTGTCTTCCGAGGGAGTAGGGGAGATATTGAAAGTGGATTTTCAGAATACGTTCCTGAAAGAACCTTGATGCGGGTTCATCCAGCTCGCCCAGTTAATGGCAATTCTTTAGCTTTTCTTATCACAGTTATTTTGATATTCATGATATTAAACTCCCCTCAGATGTTACATCATTTTTTGCTCTGGGTTGTACTGGCTATCTTTGTCATGGCTACAAGTCTGAGGATGTATGCAACTTGTCAACAACTTCAGGCACAGGCTAGGGCTCATGCTGCAGCAGCCTCTGGGTTGCTTGGCCATACTGAACTGCGTCTTCACATGCCACCATCGATTGCAATTGCAACCAGAGGAAGATTGCAGGGACTTAGACTTCAGCTTGCACTTCTTGACCGTGAATTTGATGAGCTAGATTATGATACTTTGAGAGCTCTTGACACTGATACTGCTCCTAGTACTCGTTCAATGACTGAGGAAGAGATAAATGCCTTGCCTATTCACACTTATAAAATTCCAGTCCCACCAAAGGATGGCTCAGCCAGTCTGGCATCCTCGTCAGGTGCAGCTGAGATTAAACAAGAATCTGGAGGAACAGAGGCAGGTATCAGAGGTTCAGAAGATGAGCTGACATGTACTATATGCTTGGACCAAGTTAAGAGGGGGGAGCTTGTTCGTAGCTTACCATGCTTGCATCAGTGA 702 0.4473 MSFVFRGSRGDIESGFSEYVPERTLMRVHPARPVNGNSLAFLITVILIFMILNSPQMLHHFLLWVVLAIFVMATSLRMYATCQQLQAQARAHAAAASGLLGHTELRLHMPPSIAIATRGRLQGLRLQLALLDREFDELDYDTLRALDTDTAPSTRSMTEEEINALPIHTYKIPVPPKDGSASLASSSGAAEIKQESGGTEAGIRGSEDELTCTICLDQVKRGELVRSLPCLHQ* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0583 233 MobiDBLite consensus disorder prediction 176 204 - -
Vra2g0583 233 SUPERFAMILY RING/U-box 207 232 - -
Vra2g0583 233 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 233 - -
Vra2g0583 233 PANTHER TARGET OF ERK KINASE MPK-1 1 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0583 Vra-Chr2 4619073 4625369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0583 1 233 C3H Transcription Factor Family AT3G55530 69.492 2.65e-104 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0583 K16283 - gmx:100805406 396.356