Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0554 ATGGATGAACACATGCACGGGATGGGAGGGATGGCGCCGTCGCCGCCGTCACCGTTGCCGCCAACCGCAAACGACACCATGGGCACCATGATGCACCACAAGATGATGATGCACATGACCTTCTTCTGGGGCAAAGACACTGATATCCTCTTCCAAAACTGGCCCGGAGGCAAATCGGATATGTATATCTTGGCCCTCGTTTTCGTCTTCGTCATGTCGGTTTTCGTGCAGTTGCTCTCGCACACCCGTTTCATCAAACCCGGTTCAAACCATGTCGCGGCCGGTCTGTTCAAGACCCTCTTGTTCGCTTTCAGGGTTGGTCTCGCTTATCTGGTTATGCTTTCAATCATGTCTTTTAACGGTGGCGTTTTCTTGGTTGCTGTGCTAGGTCAGACCTTGGGGTTTCTCATTACCACATTCGCTTTCAACAAATCGCCCCACGACGAGGGTTTCGATCTTCCTCCAATTTCTTGTTGA 477 0.5157 MDEHMHGMGGMAPSPPSPLPPTANDTMGTMMHHKMMMHMTFFWGKDTDILFQNWPGGKSDMYILALVFVFVMSVFVQLLSHTRFIKPGSNHVAAGLFKTLLFAFRVGLAYLVMLSIMSFNGGVFLVAVLGQTLGFLITTFAFNKSPHDEGFDLPPISC* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0554 158 MobiDBLite consensus disorder prediction 1 24 - -
Vra2g0554 158 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 157 IPR007274 GO:0005375|GO:0016021|GO:0035434
Vra2g0554 158 Pfam Ctr copper transporter family 91 137 IPR007274 GO:0005375|GO:0016021|GO:0035434
Vra2g0554 158 PANTHER COPPER TRANSPORTER 1-LIKE 1 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0554 Vra-Chr2 4389575 4390448 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0554 40 158 Inorganic Solute Cotransporters AT5G59030 45.968 2.31e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0554 K14686 - gmx:100306175 225.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0554 2 4389575 4390448 Vra2g0554 2 4389575 4390448 ECH