Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0549 ATGGCCTCTTTAGCACTCACCACCACCCTCCCCTCTCTCCGCCTCCGCCGCAACACCACCGCCGCCGCCATCAAACCCAACCGTCTGACCTCCCTTCCACGTTCCTCACTCAAACCAAACCTCAGCACTTCGATTTCTTCCTTCCCAAATTTCTCACTTAGAAAAACGAACCTCGCTCTCACTCGCAAGCACTCTTCTCTCACTGTTAGAGCTACCGCAGCCTCCATCACTCCGGCGCCGGCACCGGCACCGGCGCCGGTTCAGCCATGGCAAGGTGCCGCAATAAAACCCCTATTGGCCTCTATCGCCACGGGAGTGATCCTCTGGTTCACACCAGTTCCCGCGGGCGTAAACCGTAACGCGTGGCAATTGCTCGCGATCTTCTTAGGCACAATCGTCGGCATTATAACCCAACCGCTGCCCCTCGGCGCGGTTGCGATATTAGGTTTGGGCGTTTCCGTTCTCACCAAAACCCTAACGTTCGCCGCCGCGTTCTCCGGCTTCGGGGACCCGATCCCCTGGCTCATCGCACTCGCCTTCTTCTTCGCCAAGGGATTCATTAAAACTGGCCTCGGGAACCGCGTTGCGTACCAGTTCGTGAAGCTCTTCGGCAGCTCCTCGCTCGGGTTAGGTTACAGCCTTGTCTTCAGCGAGGCGCTGCTGGCGCCGGCGATCCCCTCAGTATCGGCGAGGGCCGGCGGGATATTCCTCCCTCTCGTAAAGTCGCTGTGCGTGGCGTGCGGGAGCAACGCTGGCGACGGGACGGAGAACAGATTGGGGGCGTGGCTCACGCTCACGTGCTTTCAGACTTCGGTGATTACGTCGGCGATGTTTCTAACGGCGATGGCGGCGAATCCGCTCTGCGCGACGCTGACGCAAAATTCCATTAACCAGACCATTGGGTGGTTGGACTGGGCCAAAGCTGCAATTGTCCCTGGCTTGGTGTCGTTGGTGTTGGTTCCGTTGATTTTGTACGTAATATACCCTCCGACTCTGAAGAGTAGTCCTGATGCTCCTAAGCTTGCGAGAGAGAAGTTGGAGAAAATGGGGCCCATGACAACCAATGAGAAGATCATGACTGCTACCTTGTTTCTCACGGTAGGACTTTGGGTATTTGGAGGACTTCTTAATGTTGATGCTGTATCTGCTGCAATTCTTGGATTATCTGTACTTCTTGTCACAGGGGTTGTTACATGGAAGGAGTGCTTAGGGGAAGGAGTTGCCTGGGATACTCTCACATGGTTTGCTGCCCTCATAGCAATGGCTGGGTATTTGAACAAATATGGCCTCATTTCTTGGTTCAGTCAAACGGTAGTCAAGTTTGTTGGTGGATTGGGTCTATCATGGCAACTATCTTTTGGGATTCTAGTTCTTCTCTACTTTTACTCTCATTACTTCTTTGCAAGTGGAGCTGCTCATATTGGCGCCATGTTTACTGCATTTTTGTCTGTTTCCACTGCTCTGGGGACTCCGCCATTCTTCGGAGCCATAGTGCTGTCCTTCCTCTCCAACCTTATGGGTGGCCTTACTCATTACGGAATTGGATCAGCTCCGGTGTTTTTCGGTGCCAACTATGTTCCCCTTGCTAAATGGTGGGGTTATGGATTCCTCATTAGTATTGTTAACATTATAATCTGGCTTGGACTTGGAGGGGTTTGGTGGAAATTCATTGGCTTATGGTAA 1683 0.53 MASLALTTTLPSLRLRRNTTAAAIKPNRLTSLPRSSLKPNLSTSISSFPNFSLRKTNLALTRKHSSLTVRATAASITPAPAPAPAPVQPWQGAAIKPLLASIATGVILWFTPVPAGVNRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLTFAAAFSGFGDPIPWLIALAFFFAKGFIKTGLGNRVAYQFVKLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNAGDGTENRLGAWLTLTCFQTSVITSAMFLTAMAANPLCATLTQNSINQTIGWLDWAKAAIVPGLVSLVLVPLILYVIYPPTLKSSPDAPKLAREKLEKMGPMTTNEKIMTATLFLTVGLWVFGGLLNVDAVSAAILGLSVLLVTGVVTWKECLGEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVSTALGTPPFFGAIVLSFLSNLMGGLTHYGIGSAPVFFGANYVPLAKWWGYGFLISIVNIIIWLGLGGVWWKFIGLW* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0549 560 Pfam Sodium:sulfate symporter transmembrane region 97 560 IPR001898 GO:0016020|GO:0022857|GO:0055085
Vra2g0549 560 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 112 554 IPR001898 GO:0016020|GO:0022857|GO:0055085
Vra2g0549 560 CDD ArsB_NhaD_permease 132 554 - -
Vra2g0549 560 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 8 560 - -
Vra2g0549 560 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 8 560 IPR030676 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0549 Vra-Chr2 4340785 4344181 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0549 10 559 Antiporters AT5G12860 80.143 0.0 854
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0549 - - vun:114169835 1022.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0549 2 4340785 4344181 Vra2g0549 2 4340785 4344181 ECH