Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0543 ATGGAGATCATCTCAAGCTTCCACAGAGACCTCAATGACATGAGGGAGTATTACGAGAGCGGAAAGACTAAGCAAGCATCTTGGAGAGAGTCTCAGCTCAAAGCCTTGCGTTGCTTCCTCATGGAAAAACAACAACATATCATGGAGGCCCTTATGCAGGATCTTGGGAAACATCAACTTGAAGCTTTCAGAGACGAGATAGGGACTTTGATCAAGACCTTAAATCTGGCATTGAAGTCTTTGAAAGCTTGGATGTCAGGCAAAAAGGCTGAATTGCCACAAGTAGCGTTGTTCACCAGTGCAGAAATTGTTTCAGAACCACTTGGTTTGGTCCTCATTATTTCATCTTGGAATTTTCCATTTGGACTATCCTTGGAGCCGCTTATTGGAGCAATAGCTGCGGGAAACGTGGCAATCTTAAAGCCTTCAGAGTTGTCTCCAGCTTCTTCTTCTCTTCTCTTTTCCAGTCTCACCTCTTATTTGGACAATAAAGCCATTAAGGTGATCCAAGGAGGACCACAAGAGACCCAACAACTACTAGAGCAAAGATGGGACAAAATCTTCTTCACAGGAAGTGCACGTGTGGGGCGGATTGTTATGTCTGCTGCTGTGAAGAATTTGACTCCTGTGACTTTGGAGCTGGGTGGAAAATGCCCTGCTGTTGTTGACTCCCTTTCATCTTCCTGGGATATAGAGACCACTGTGAAGAGAATTATTGTGGGAAAATTTGGGACTTGTGCTGGTCAAGCATGCATAGCCATTGATTATGTCCTGGTGGAAAATAAGTATTGCTCAAAACTGGTGGAACTGATGAAGGTCTGGATCAAGAAAATGTTTGGAGAAAACCCTCAACGTTCCAAAACTATCACCAGGATAGTTAACAAACACCACTTCTCTAGATTGAACAACCTTCTTGCTGATAAAATGGTCAAAGAATCAGTGGTTTATGGTGGCTCAGTGGACGAAGAAAACTTATTTATTGAGCCAACCATCTTGGTGGATCCCCCACTGGACGCAGCAATTATGTCAGAAGAGATTTTTGGACCATTACTTCCAATTATTACTGTAGAGAAGATTGAAGACAGTATTAGATTCATAAGGAGTAGGCCTAAGCCTCTTGCCCTTTATGTCTTCACAAAAAACAAAACCCTAGAGAGAAGAATGATATCTGAAACATCATCTGGCAGTTTAACTTTCAATGATGCAATACTACAATATGCAGCTGATTCTCTTCCATTTGGAGGAGTGGGAGAAAGTGGGTTTGGCATGTACCATGGGAAGTTCTCCTTTGACACATTTAGCCACCAGAAGGCAATAGTAAGAAGAAGTTTTCTCACTGATTTCTGGTTTAGATATCCTCCATGGACACTAAATAAGTTGCAACTACTTGAAGAGTGTTACAATTATGATTATCTGGGGATGCTCCTTGTCATGCTGGGCTTAAAGAGATCATCAAAAGGCTTATTTGCAAATCATATGTAG 1482 0.419 MEIISSFHRDLNDMREYYESGKTKQASWRESQLKALRCFLMEKQQHIMEALMQDLGKHQLEAFRDEIGTLIKTLNLALKSLKAWMSGKKAELPQVALFTSAEIVSEPLGLVLIISSWNFPFGLSLEPLIGAIAAGNVAILKPSELSPASSSLLFSSLTSYLDNKAIKVIQGGPQETQQLLEQRWDKIFFTGSARVGRIVMSAAVKNLTPVTLELGGKCPAVVDSLSSSWDIETTVKRIIVGKFGTCAGQACIAIDYVLVENKYCSKLVELMKVWIKKMFGENPQRSKTITRIVNKHHFSRLNNLLADKMVKESVVYGGSVDEENLFIEPTILVDPPLDAAIMSEEIFGPLLPIITVEKIEDSIRFIRSRPKPLALYVFTKNKTLERRMISETSSGSLTFNDAILQYAADSLPFGGVGESGFGMYHGKFSFDTFSHQKAIVRRSFLTDFWFRYPPWTLNKLQLLEECYNYDYLGMLLVMLGLKRSSKGLFANHM* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0543 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 437 IPR016162 GO:0016491
Vra2g0543 493 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 419 IPR016163 GO:0016620
Vra2g0543 493 SUPERFAMILY ALDH-like 14 456 IPR016161 GO:0016491
Vra2g0543 493 PIRSF ALDH 2 476 IPR012394 GO:0006081
Vra2g0543 493 PANTHER ALDEHYDE DEHYDROGENASE 5 491 - -
Vra2g0543 493 PANTHER ALDEHYDE DEHYDROGENASE 5 491 IPR012394 GO:0006081
Vra2g0543 493 Pfam Aldehyde dehydrogenase family 17 439 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0543 Vra-Chr2 4290278 4304610 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0543 6 483 Aldehyde Dehydrogenase Gene Family AT4G36250 53.556 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0543 K00128 - gmx:100817701 828.165