Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0497 ATGGGGCACAGTTCGAAGAAGAAGAAGCGCGGAGGCGGGAGCGGTCGCCGGAGCAAGGGGAGAACGCAGTCCAAAGATCACGCTTCTCAATCAGGCGCCGACGATTACGACCAGCTCTCCGAAGAGATTACCGCAGTATGCGCTATTTTCCAAGAAGACTGCAAAGTTCTTCCAGGCTCGCCTCCTCGTATAGTTATTAAGCTCAGGCCTTACTCAAAGGACATGGGTTATGAAGATCTAGATGTTTCTGCTGCTCTTGTTGTCAGGTGCTTGCCTGGGTATCCTTTCAAGTGTCCCAAGCTGCAGATTACACCGGAAAAAGGGTTATCAGAAGCTGATGCTGATAAGCTCTTATCTCTCCTCCATGATCAGGCTACTTTAAATGCTAGGGAGGGACGAGTAATGATCTTTAATCTGGTTGAGGCTGCTCAGGAATTTCTTTCTGGTATTGAGCCAATTGCCATATCAAATGATTCTAAGCTTCTACACTCAACTGTGGAAAGCAATGAAGAATTGTTTACCAAGGATAAGACATCTTTAAGTAAGAAGGGTTCCTTTGTTTATGGTTTCATAGACCTTTTCAGTGCCTATGGAGAAACGTGGAGTTGGGGTTTTGGAATGGATGAAACTGCCGGGAAAAGTTCTTCTCCCTTGTCCAATTTAGATGGCTCAAAACAAAGCTTTGAGGCTCATGAGAAGAAATTTAATAGTAAGGAAATGCCATTAGTTATGCAAGAACATCCTGCCGAATTAGGTACTGTCATAGAAGTTATTGAAGATAGCAAAAGTAGTTTATCTTTGACTAGTTCAAGTACATCATCAGAGGAGGATTTTGTAGGAAACGATAATGAAGGTGAGAAAGAGTATTTTATTGTTGATAAGTATACAACTGAAGATAATGACGGTATTAATGAAAGTGAGTCTCCAAAGGCTCTGCCTTCTGACTTCTTGCCTCATCATCAGCCATCTCAAACAATTGAAAAGGATATACTAATGGTTCACATGCTTCGCCTTGTTTGTGCTTCTAATAGATCATTGGCTGACTCTTTGCCACAAGTGGTAACCGAGCTGTATAATATAGGGATCATTTCTGATTTAGCACGCGATATGGCATGCAAATCACCTTCCATTTTTAACAAAACCTTTGATCGTGTTTTCCACAAACACCTGGCTTCATCGAGAATATCTCAATTTTGGAACCCTAATCTTGGAGGCTCAAACACAGTTTCACATACTTCTCGATATTTGAATGACTTTGAGGAGCTGCGTCCTCTAGGTCATGGTGGTTTTGGTCATGTTGTACTGTGCAAAAATAAACTTGACGGAAGGCAATATGCAGTAAAGAAAATTCGCCTTAAGGACAAAAGCATGCCTGACCGAATATTAAGGGAAGTAGCTACACTTTCTCGTTTACAGCATCAACATGTTGTTCGGTATTATCAGGCATGGTTTGAAACTGGAGTTTCTGATTCTTCTGGTGATTCTGCTTGGGGTTCAAAGACTACACTGAGCTCTACTTTCAGCTTTACCGCTGCAACTTCCAATGATGTCTTTGGGCATGAGAATCAGCTTGAATCAACTTACCTTTATATACAAATGGAATACTGTCCCAGGACTCTTCGCCAGAAGTTTGAATCATACAATCATTTTGACAAAGAACTGGCTTGGCATTTGTTTCGTCAAATAGTGGAAGGCTTGGCACACATACATGGACAAGGAATAATTCATCGGGATTTAACACCAAATAACATATTCTTTGATGCTCGCAATGATATTAAAATTGGTGATTTTGGTCTTGCCAAGTTCTTGAAGTTAGAGCAGCTGGACCAAGATGTGGGCCACACTGCTGATGCAACTGGAGTTTCCATTGATGGCACTGGACAAGTGGGGACATATTTCTATACAGCTCCTGAAATTGAGCAAGGATGGCCCAAGATTGATGAAAAGGCTGATATGTACAGCTTAGGAGTGGTTTTCTTTGAGCTTTGGCACCCATTTGGGACAGCAATGGAGAGACACGTTGTTTTATCTGATTTGAAACAGAAAGGGGAAGTTCCATCAATTTGGGTTGCTGAATTTCCAGAACAGGAATCCTTACTGAGGCAGTTAATGTCTCCAGCTCCTTCAGATCGCCCTTCTGCCACAGAACTTCTGCAAAATGCATTTCCTCAGCGAATGGAGTCTCAATTATTGGATGATATCCTTAGAACAATGCAGAAATCAGAGGATACAAGCATATATGATAAAATTTTAAATGCTATCTTTGACGAAGAGATGCTAAGCACAAAACACATTCGTCAGGTTGGTAGATTGGGATCAGTTGGAGATAGCAGTTCATCCATTCAGTACACAGAATTTGAAACAGAGGTTCGGGATTATGTTGTAGATATGAACAGGGAAATTTTTAGACAGCATTGTGCAAAGCACCTTGAAATATCAACAATGAGATTATTGGAAGATTGTCCACAGTTTAATAGAAATGCAGTTAAACTTCTGACACATGGAGGAGACATGCTTGAACTTTGCCATGAGTTGCGTTTTCCGTTTGTGAACTGGATTATATTCAACCAGAAATCTTCATTTAAACGATATGAGATATCATGTGTCTTTAGAAGAGCAGTTGGTCATTCATCACCAAATCGCTACCTTCAGGGAGATTTTGACATTATTGGTGGCACCTCGGCATTGACAGAAGCAGAGGTCATAAAGGTCACAAGGGACGTAGTCACTTGTTTTTTTCATGCAGATTCATGTGACATTCATCTCAACCATGCTGACCTTCTGGATGCAATTTGGTCATGGACTGGAGTAAAGGTAGAACACAGACTCAAAGTAGCAGAGCTTCTCTCAATGATGGGTTCTTTGCGCCCACAATCCTCAGAAAGGAAATCAAAATGGGTCGTGATAAGGCGGCAGCTTTTGCAGGAACTGAATTTAGCAGAGGCTAAGGTAAATAGGTTACAGACTGTAGGTTTAAGATTTTGTGGATCTGCAGATCATGCACTCCCCCGATTAAGAGGAGCTCTTCCATCTGATAAACGTACATTCAAGGTGCTTGATGAGTTGTCTGAGCTTGTCAGTCTCCTGAGAATTTGGAAGATTGAAAAAAATATATATATTGATGCGTTAATGCCACCAACTGAAAGTTATCACAGAGATTTGTTTTTTCAGGTATACTTAAGGAAGGAGAACAGTCCTGGATCTCTCTCTGAAGGTGCCTTGCTGGCTGTTGGTGGTCGATATGATTACTTGCTTCAGCAGCTGTGGAGAAGTGACTCTAAAGGAAATCCTCCCACTGGTGTGGGGACTAGCATTGCACTGGAGACAATAATTCAGAATTGTCCTGTAGATATCAAGCCCAATAGAAACGAAGGCACCACCAATATTCTTGTCTGTTCTAGAGGCGGAGGAGGTCTCCTGGTGGAGCGCATGGAGCTAGTTGCGGAATTATGGGAGGAGAACTTTAAGGCTGAATTCGTTCCTACCCCTGATCCCAGTCTTACGGAGCAGTACGAGTATGCTAATGAACATGGTATCAAATGCCTTGTCATCATCGCAGATACAGATTTTTCCTTGACAGACTCTGTTAAGGTTCGACACCTTGAACATAAGAGGGAGAAAAGTGTGGAGAGAAAAAACCTAGTTAAGTTTCTATCGGATGCCATGGCAACACAATTTAGAAATCCCTCCATTTGGATTTGA 3702 0.4173 MGHSSKKKKRGGGSGRRSKGRTQSKDHASQSGADDYDQLSEEITAVCAIFQEDCKVLPGSPPRIVIKLRPYSKDMGYEDLDVSAALVVRCLPGYPFKCPKLQITPEKGLSEADADKLLSLLHDQATLNAREGRVMIFNLVEAAQEFLSGIEPIAISNDSKLLHSTVESNEELFTKDKTSLSKKGSFVYGFIDLFSAYGETWSWGFGMDETAGKSSSPLSNLDGSKQSFEAHEKKFNSKEMPLVMQEHPAELGTVIEVIEDSKSSLSLTSSSTSSEEDFVGNDNEGEKEYFIVDKYTTEDNDGINESESPKALPSDFLPHHQPSQTIEKDILMVHMLRLVCASNRSLADSLPQVVTELYNIGIISDLARDMACKSPSIFNKTFDRVFHKHLASSRISQFWNPNLGGSNTVSHTSRYLNDFEELRPLGHGGFGHVVLCKNKLDGRQYAVKKIRLKDKSMPDRILREVATLSRLQHQHVVRYYQAWFETGVSDSSGDSAWGSKTTLSSTFSFTAATSNDVFGHENQLESTYLYIQMEYCPRTLRQKFESYNHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDVGHTADATGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHPFGTAMERHVVLSDLKQKGEVPSIWVAEFPEQESLLRQLMSPAPSDRPSATELLQNAFPQRMESQLLDDILRTMQKSEDTSIYDKILNAIFDEEMLSTKHIRQVGRLGSVGDSSSSIQYTEFETEVRDYVVDMNREIFRQHCAKHLEISTMRLLEDCPQFNRNAVKLLTHGGDMLELCHELRFPFVNWIIFNQKSSFKRYEISCVFRRAVGHSSPNRYLQGDFDIIGGTSALTEAEVIKVTRDVVTCFFHADSCDIHLNHADLLDAIWSWTGVKVEHRLKVAELLSMMGSLRPQSSERKSKWVVIRRQLLQELNLAEAKVNRLQTVGLRFCGSADHALPRLRGALPSDKRTFKVLDELSELVSLLRIWKIEKNIYIDALMPPTESYHRDLFFQVYLRKENSPGSLSEGALLAVGGRYDYLLQQLWRSDSKGNPPTGVGTSIALETIIQNCPVDIKPNRNEGTTNILVCSRGGGGLLVERMELVAELWEENFKAEFVPTPDPSLTEQYEYANEHGIKCLVIIADTDFSLTDSVKVRHLEHKREKSVERKNLVKFLSDAMATQFRNPSIWI* 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0497 1233 Gene3D Bira Bifunctional Protein; Domain 2 781 1117 IPR045864 -
Vra2g0497 1233 ProSiteProfiles RWD domain profile. 41 150 IPR006575 GO:0005515
Vra2g0497 1233 SUPERFAMILY Class II aaRS ABD-related 1130 1223 - -
Vra2g0497 1233 PANTHER HISTIDYL-TRNA SYNTHETASE 20 1233 - -
Vra2g0497 1233 ProSitePatterns Tyrosine protein kinases specific active-site signature. 574 586 IPR008266 GO:0004672|GO:0006468
Vra2g0497 1233 ProSitePatterns Protein kinases ATP-binding region signature. 425 449 IPR017441 GO:0005524
Vra2g0497 1233 SMART RWD2001b 41 150 IPR006575 GO:0005515
Vra2g0497 1233 Pfam Histidyl-tRNA synthetase 870 1109 IPR041715 -
Vra2g0497 1233 Pfam Anticodon binding domain of tRNAs 1128 1225 IPR024435 -
Vra2g0497 1233 Gene3D - 1124 1223 IPR036621 -
Vra2g0497 1233 Pfam Protein kinase domain 419 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra2g0497 1233 SUPERFAMILY Class II aaRS and biotin synthetases 783 1112 IPR045864 -
Vra2g0497 1233 SUPERFAMILY UBC-like 36 147 IPR016135 -
Vra2g0497 1233 MobiDBLite consensus disorder prediction 1 36 - -
Vra2g0497 1233 ProSiteProfiles Protein kinase domain profile. 419 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra2g0497 1233 Gene3D Transferase(Phosphotransferase) domain 1 538 733 - -
Vra2g0497 1233 Coils Coil 970 990 - -
Vra2g0497 1233 Gene3D Ubiquitin Conjugating Enzyme 28 153 IPR016135 -
Vra2g0497 1233 SUPERFAMILY Protein kinase-like (PK-like) 415 740 IPR011009 -
Vra2g0497 1233 MobiDBLite consensus disorder prediction 1 16 - -
Vra2g0497 1233 PANTHER EIF-2-ALPHA KINASE GCN2 20 1233 - -
Vra2g0497 1233 MobiDBLite consensus disorder prediction 300 319 - -
Vra2g0497 1233 Pfam RWD domain 38 147 IPR006575 GO:0005515
Vra2g0497 1233 CDD STKc_EIF2AK4_GCN2_rpt2 413 719 - -
Vra2g0497 1233 Gene3D Phosphorylase Kinase; domain 1 407 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0497 Vra-Chr2 3801796 3820616 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0497 408 722 MAP Kinase Kinase Kinase AT1G63700 26.316 1.53e-22 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Vra2g0497 Pkinase 8.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0497 K16196 - gmx:100797996 2144.78