Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0496 ATGTTTTGGTTTCTTTGTATTATGGGGTTCTCGCTAAAACGACAGTTGTTGAACGGGAATCCATGTTCATTTAGGCTTCTGTTTGAGCTGGTGGTTTTATCGTACTTGTGGTTACAAGTCACAAGCCTTGGTTCCATGTCATCCATTGCAATCTCGTACGGCGAAAAGGGTTCTGTGTTTTGTGGTTTGAAATCTGATGGCTCTCACACAGTGACATGTTATGGAGGAAATTCAGCCATAATCTATGGAACACCAGCCCGGTTTTCATTTGTTGGTCTAACAGCTGGAGACGGCTTTGTCTGTGGGCTTCTGATGGGTTCCAATCAACCGTACTGCTGGGGTAGCAGTGCCTACATTGAAATGGGAGTGCCTCAACCTATTATCGGAGGAGCACAGTACCTAGAAATCAGTGCTGGTGATTACCATGTTTGTGGCTTGAGGAAACCTTTGACTGGAAAACACAGGTACATTTCCTTGGTTGATTGCTGGGGCTACAACATGACCAAAAACTATGTTTTTGGGGGACACATTGAATCAATCACAGCTGGTTCCGAATTCAATTGTGGTCTTTTTTCTCAGAACAGGACTGTGTTCTGCTGGGGTGATGAGACTAATAGCCTGGTGATTAGTTTGATTCCACAAGACAAGAGATTCCAGAAAATTTCAGCCGGTGGGTATCATGTGTGTGGAATCTTAGAGGGAGTGAATTCCAGGACTGTTTGTTGGGGGAGAAGCTTGAACCTTGGGGAAGAAATTTCAGTGGCACATGCAGGTCAAGGAAACGTTGATTTGGCTCCAAATGATCCCATGCTTTCTGTAGTGGGAGGGAAGTTCCATGCATGTGGGATTAAGAGCTATGATCGTGGAGTGATTTGTTGGGGCTTTATCATCAAACGAAGCACTCCATCTCCTAGAGGGATTAAGGTTTTTGAAGTTGCAGCTGGTGATTACTTTACTTGTGCAGTTCTTGCTGACAAATATCTTATGCCTTCATGTTGGGGAGTTGATTTTCCCACCTCACTTCCTTTAGCTGTTTCACCAGGAATGTGTCAACCTGCTCCATGCCCTCCTGGTTCCTATGCCATTAATCAGCATAAAGGTCTCTGCAAATCACCAGATTCTCGTGTTTGCATGAGGTGCAGCGGTGCTTGTCCTCCTGAAATGTATCAGAAGAGTGCATGCAATTTGGCTTCTGATAGACTATGTGAATATAACTGTGCATCTTGTTCTTCATCCCAATGCTTCACGAACTGCTCCTCTTCATATTCCAATGCTTCCACTGAGAAGAAAACTGAAAAATTCTGGGCTTTACAGTTGCCAGTTGTCATTGCCGAGATTGCTTTTGCGGTTTTCATAGTCAGTGTGGTGTCATTAACTGCAATTTTATACGTCCGCTACAGGCTAAGAGATTGCGAGTGTTCAAAAGGATCAAAGGGGAAGAAACTGAACGGGAGTTCTTCCCTGCAAAACGAGAATAAGGTGAGGCCAGACATTGAGGAGTTGAAGATCAGAAGGGCTCAAATGTTCACCTATGAGGAACTAGAAAGTGCAACTTGTGGATTCAAGGAAGAGTCCATAGTGGGGAAGGGGAGTTTCTCGTGTGTGTTCAAGGGAGTGTTGAAAGATGGGACAGTTGTTGCTGTGAAAAGGGCAATAGTGTCTCCCAACATGCAGAAGAATTCCAAGGAGTTTCACACAGAACTTGACTTGCTCTCAAGGTTGAACCACGCTCATTTGCTCAACCTACTAGGCTATTGTGAAGAAGGTGGAGAGAGACTTCTTGTGTATGAGTTCATGGCTCATGGCTCCTTGCACCAACACTTGCATGGGACAAACCAAGTGTTGAGAGAACAGTTAAATTGGATAAGAAGAGTGACTATTGCAGTGCAAGCAGCACGTGGAATTGAATATTTGCATGGCTATGCTTGCCCTCCTGTGATTCACAGAGACATAAAGTCCTCAAACATTCTCATTGATGAAGAACACAATGCAAGAGTGGCTGACTTTGGTTTATCATTGTTAGGTCCTGCAGATAGTGGTTCACCACTGGCTGAACTCCCAGCTGGGACTTTTGGCTATCTTGATCCTGAATACTACAGGCTTCATTACCTCACAACCAAATCAGATGTGTATAGTTTTGGTGTTCTTCTTTTGGAGATTCTGAGTGGTAGAAAAGCCATTGACATGCAATATGAAGAAGGGAACATAGTGGAATGGGCAGTACCTCTTATAAAATCAGGAGATATAACTGAAATTTTGGACCCAGTTTTGAAACCCCCTCCTGATGTAGAAGCCTTGAAGAGAATAGCCAATGTGGCTTGTAAGTGTGTGAGGATGAGAGGGAAAGAGAGACCCTCAATGGACAAAGTAACAACAGCTTTGGAGAGAGGTCTTGCACAGTTAATGGGTAGTCCATGCATTGAGCAGCCTATTTTGCCAACTGAGGTGGTTTTGGGAAGCAACAGATTGCACAAGAAATCATCTCAAATATCCTCAAACAGGTCAATTTCTGAGACTGATGAGGACCAAAGGATTGAGTTCAGGGCACCCTCATGGATTACCTTTCCCAGTGTGACATCTTCTCAAAGGAGAAAATCATCAGTGTCTGAGGTAGATGTTGATGGGAAGAACAATGCAGAAGGTAAGAACTTGAGCAATGTTGGAGGTGCTGCTGATGTTTTGAGAAGCCTTGATGAAGAGATTGGTCCTGCTTCTCCTGGAGAGAGGCTGTTCTTGCAACACAACTTCTAA 2751 0.4409 MFWFLCIMGFSLKRQLLNGNPCSFRLLFELVVLSYLWLQVTSLGSMSSIAISYGEKGSVFCGLKSDGSHTVTCYGGNSAIIYGTPARFSFVGLTAGDGFVCGLLMGSNQPYCWGSSAYIEMGVPQPIIGGAQYLEISAGDYHVCGLRKPLTGKHRYISLVDCWGYNMTKNYVFGGHIESITAGSEFNCGLFSQNRTVFCWGDETNSLVISLIPQDKRFQKISAGGYHVCGILEGVNSRTVCWGRSLNLGEEISVAHAGQGNVDLAPNDPMLSVVGGKFHACGIKSYDRGVICWGFIIKRSTPSPRGIKVFEVAAGDYFTCAVLADKYLMPSCWGVDFPTSLPLAVSPGMCQPAPCPPGSYAINQHKGLCKSPDSRVCMRCSGACPPEMYQKSACNLASDRLCEYNCASCSSSQCFTNCSSSYSNASTEKKTEKFWALQLPVVIAEIAFAVFIVSVVSLTAILYVRYRLRDCECSKGSKGKKLNGSSSLQNENKVRPDIEELKIRRAQMFTYEELESATCGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIVSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLHQHLHGTNQVLREQLNWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSGSPLAELPAGTFGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKSGDITEILDPVLKPPPDVEALKRIANVACKCVRMRGKERPSMDKVTTALERGLAQLMGSPCIEQPILPTEVVLGSNRLHKKSSQISSNRSISETDEDQRIEFRAPSWITFPSVTSSQRRKSSVSEVDVDGKNNAEGKNLSNVGGAADVLRSLDEEIGPASPGERLFLQHNF* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0496 916 Gene3D Phosphorylase Kinase; domain 1 491 598 - -
Vra2g0496 916 MobiDBLite consensus disorder prediction 863 886 - -
Vra2g0496 916 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Vra2g0496 916 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Vra2g0496 916 SUPERFAMILY Protein kinase-like (PK-like) 501 794 IPR011009 -
Vra2g0496 916 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 354 402 IPR001368 GO:0005515
Vra2g0496 916 SMART serkin_6 521 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra2g0496 916 Pfam Protein tyrosine and serine/threonine kinase 524 793 IPR001245 GO:0004672|GO:0006468
Vra2g0496 916 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 21 916 - -
Vra2g0496 916 SUPERFAMILY RCC1/BLIP-II 32 295 IPR009091 -
Vra2g0496 916 ProSiteProfiles Protein kinase domain profile. 521 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra2g0496 916 PANTHER RECEPTOR-LIKE KINASE 21 916 - -
Vra2g0496 916 Gene3D - 89 351 IPR009091 -
Vra2g0496 916 Gene3D Transferase(Phosphotransferase) domain 1 599 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0496 Vra-Chr2 3795422 3799346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0496 26 916 Receptor kinase-like Gene Family AT3G59420 68.374 0.0 1246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Vra2g0496 PK_Tyr_Ser-Thr 5.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0496 - - gmx:100797455 1691.4