Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0493 ATGGAGTTTGAGATTGATGGTACTGGCGAGACAGTAACAAATGCTGCTATAGATGAGATTAGTAGCGTGGCTGATGACAACGGAGAAGGTGAATCTATCGAGCCAAATTACAAACAAGATGAAGGTGATAATGTTGCTCAAGATTCCTCTGGGATCACAATCCCATTTGCAATTCCCACAGTATCAGTTGTTGCAGTTGAAGAGCCGTATGTGGGTCAGGAATTTGAGTCAGAATCAGCAGCACAGGCATTTTACAATGCATATGCCACAGATGTCGGATTCATCGTGCGTGTGAGTAAACTGTCGCGATCAAGGCGTGATGGAACTGCCATTGGACGTGCTCTTGTTTGCAACAAAGAAGGTTTCAGAATGCCTGACAAGCGTGAGAAGATTGTGAGGCAAAGGGCTGAGACCAGGGTTGGTTGCCGGGCAATGATTATGGTGAGGAAAGTTAGTTCTGGCAAATGGGTTGTTACAAAGCTTGTGAAGGAACATACACATCCTTTGACTCCTGGTAAAGGCAGAAGGGATTTCGTTTATGAACAATATCCGAACGAACATGACAAAATTCGGGAACTATCTCAGCAGTTGGCATGTGAGAAAAAGCGATCTGCAACCTATAAAAGACATCTTGAACTGATATTTGAGCACATTGAAGAGCATAACGAGAGTCTTTCAAAGAAAATACAGAACATAGTAGACAGTGTGAGGGAGATGGAAAAAACCAAAGAACAACAGAGTCAACTCTAA 750 0.4307 MEFEIDGTGETVTNAAIDEISSVADDNGEGESIEPNYKQDEGDNVAQDSSGITIPFAIPTVSVVAVEEPYVGQEFESESAAQAFYNAYATDVGFIVRVSKLSRSRRDGTAIGRALVCNKEGFRMPDKREKIVRQRAETRVGCRAMIMVRKVSSGKWVVTKLVKEHTHPLTPGKGRRDFVYEQYPNEHDKIRELSQQLACEKKRSATYKRHLELIFEHIEEHNESLSKKIQNIVDSVREMEKTKEQQSQL* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0493 249 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 245 - -
Vra2g0493 249 MobiDBLite consensus disorder prediction 21 45 - -
Vra2g0493 249 Coils Coil 222 242 - -
Vra2g0493 249 Pfam FAR1 DNA-binding domain 84 170 IPR004330 -
Vra2g0493 249 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 2 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0493 Vra-Chr2 3778187 3780778 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vra2g0493 FAR1 1.7e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0493 - - var:108338935 469.929