Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0487 ATGGAAAGAGATAAAGACAACAAATCCCCTCCTCTGCCACCTTCGTCTTCCTCATCCCAACCTTTCAGCCATGACATCGTCGGAATGCCCGATAATCCAATCAAAAACAGGGGCCATAGACGCGCCCATTCCGAGATTATCACCCTTCCCGATGACCTCACCTTCGACACTGATCTCCCCCTCGATGACGACTTCCTCGCCCTCGTAGATCATATTAACTCCCCGCCTTTGCCTGAAGATGACAACAAAATTATCGTCAACAACAACGATTACAGCAGTAACAATCACGATAACAACGTTGGTAACGAAAGGCCGAGGGTTAGACACCAGCATAGCCATTCCATGGATTTGTCCATCCAGCCGGAGATGCTGGTCTCCGGTGCCGATGATGTGTCCGGCGTGGATACCAAAAGGGCTATGTCTACTGACAAGCTTGCTGAGCTTGCCTTAATTGATCCCAAGCGGGCTAAAAGGATATGGGCAAACAGACAGTCTGCTGCAAGATCAAAAGAAAGGAAGATGCGTTACATTTCTGAGCTTGAAAGGAAAGTGCAGACATTGCAAACAGACGCAACATCCTTGTCTGCACAATTAACTCTCTTGCAGAGAGATACAAACGGACTGAATGCTGAGAACGGTGAGTTGAAGTTGCGGTTGCAAACGATGGAGCAACAGGTTCACTTGCAAGATGCATTAAATGATGCATTAAAAGAAGAAATTCAGCATTTGAAATTAATGACTGGACAAGCCATTTCAAATGGAGGACACTTTGCTTCATTTGGTGGTGGGCAACAATTCTATCCCAATAATCACGCCATGTACACTCTTTTGGCTGCACAAAAGTTTCAACAACTTCAAATTCAATCCCAGAAGCAGCAGCAGCAGCATCAACTTCAGCAACAACAACAACAATTTCAGCAACAACAACAACAACTTCAACATCAACTACATCAGCAACAGCAACAACAGCAACAACAAACAACAGCAGCAGGTAGTGTAACATCAACAAATGTGGTACTTGAATAA 1026 0.4493 MERDKDNKSPPLPPSSSSSQPFSHDIVGMPDNPIKNRGHRRAHSEIITLPDDLTFDTDLPLDDDFLALVDHINSPPLPEDDNKIIVNNNDYSSNNHDNNVGNERPRVRHQHSHSMDLSIQPEMLVSGADDVSGVDTKRAMSTDKLAELALIDPKRAKRIWANRQSAARSKERKMRYISELERKVQTLQTDATSLSAQLTLLQRDTNGLNAENGELKLRLQTMEQQVHLQDALNDALKEEIQHLKLMTGQAISNGGHFASFGGGQQFYPNNHAMYTLLAAQKFQQLQIQSQKQQQQHQLQQQQQQFQQQQQQLQHQLHQQQQQQQQQTTAAGSVTSTNVVLE* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0487 341 MobiDBLite consensus disorder prediction 10 25 - -
Vra2g0487 341 MobiDBLite consensus disorder prediction 1 40 - -
Vra2g0487 341 Coils Coil 170 197 - -
Vra2g0487 341 SUPERFAMILY Leucine zipper domain 154 205 IPR046347 GO:0003700|GO:0006355
Vra2g0487 341 Coils Coil 282 322 - -
Vra2g0487 341 Coils Coil 205 239 - -
Vra2g0487 341 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 152 215 IPR004827 GO:0003700|GO:0006355
Vra2g0487 341 Pfam bZIP transcription factor 154 208 IPR004827 GO:0003700|GO:0006355
Vra2g0487 341 CDD bZIP_plant_RF2 155 204 IPR044759 GO:0003700|GO:0006355
Vra2g0487 341 SMART brlzneu 150 214 IPR004827 GO:0003700|GO:0006355
Vra2g0487 341 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 92 301 - -
Vra2g0487 341 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 16 59 - -
Vra2g0487 341 Gene3D - 153 206 - -
Vra2g0487 341 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 92 301 - -
Vra2g0487 341 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 16 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0487 Vra-Chr2 3749253 3753899 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0487 10 279 bZIP Transcription Factor Family AT1G06070 63.036 3.93e-121 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vra2g0487 bZIP_1 1.9e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0487 - - vun:114169967 480.33