Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0411 ATGTTTGTTTCTTGTCAAAAATACAACCCCTACTTTCCCTGTTCCTCGTTTCCACTGCACAACCCAACAACAACATGCACCATTTTCAATTGCCAAAACCCAAAGGAGCATCACTCTATTATCCGGAAGCACAATTCAAAATCCACTGCCTATCTCCTTCAGCATCTCGCTCTCAAAGATGGGGTACCCATTTCCACTTCCATTCCCAAACCCAGCGAACTTCTAGACCCAATGCCCCACGATGAGAAAGTTAAGGTTTTGGAGCTTTCCCTCGTCAGAAAAAGGACCCCTCAGTTTCCCGGTTCCATCTACGCTCAATCTCCCGGCGACCCTGATGTGGGTTCTTCTCTGCCTCCTATCCGCACTCTCTTTCAATCAGGTGTGGACCCTGATGATAAAGATGAGAAGGAAGAGGAGGAGGAGATGATTATGCGAGCTCTCGAGATTCGAAGAAAGGTCACCGAAGAGGTTTTCAAAGAAGCCTTGCGGAAGGGAAAGTTTGGAATCACCTACTCTACTAATTTGATTGGCAGGTTATCCGGCTTTCTGGATCATATCATGATTGAAGCTGCTAACTTGAAAAGATTGCCCGGGTTTTCAAACTCCTCATTCAATTTACGCGCCAAAACTGTTATTGACGACTCTAAAGTTGTGCCACTTATTAGATGGTTGAAGCACAATGCACTGTCGTATCCTCGGATAGCGAAGGTCATTTTGATGTCAAGAGGAAAACCTGAGGCCATAAGAAGTTTTGTCATGTGGTTGAAATCGGTACGTGTGAAAGGTGAGTTTCTTGGTGTTGTAATGTTGAAGGCCGGAGATAATATTTTGCAGCGCAGACATGAGGAGCTGGATGAGATTGTTCAATATTTGGAGTCCAATGGAGTAAGGAGGGATTGGATGGGTTATGTCATTAGTCGTTGTCCTCAGTTATTGTCTTACAGCTTAGAAGAAGTGAAGATTCGTGTACATTTCTTCCTAGATATGGGTTTAAATGAGAAGGATTTTGGGACAATGGTTTTTGATTTTCCCAGAGTTCTCGGTTACTATTCTCTCGAAGAAATGAATGAAAAGGTTAATTACTTAAAAGAATTTGGGCTTCAACTTGGGGATGTGGGCAAATTGCTTGCATTTAGGCCACAATTGATGGCTTGCAGTATCGAGGAACATTGGAAGCCTCTTGTAAAGTATCTGTATTATTATGGGATCACTCGAGATGGCATGAAGAGGATGCTTATCATTAAACCAATGGTGTTTTGTGCTAACTTGGAGAAGACTATTGTGCCAAAGGTAAAATTTTTTGAGGACATAGGGGTTCACAATGAAGGGATTGGCAGCATGCTTGTGAAGTTTCCACCTCTACTCACTTACAGCCTGCACAAGAAAATTAGACCAGTGGTTATATTCTTGATGACCAAAGCTGGAGTCAAGGAGAAAGATATTGGCAAGGTTGTGGCTCTTGGACCTGAGCTCTTGGGATGCAATATAGTACATAAGCTTGATGTGAATGTAAAATATTTTTTATCTCTTGGCATACGTCTTCGGCAATTGGGTGAGATGATTACTGATTTCCCATTGCTGCTCAGATACAATCCAGATGTCCTTCGTCCCAAGTATATTTATTTGCGAAAATCCATGATCAGGCCTTTGGAAGATGTCATTGAGTTTCCAAGGTTTTTCAGTTATTCTCTTGAGGGTCGAATTATCCCAAGGCACAAGGTTCTAGTAGAGAACCATATTAATATTAAGCTGAGATACATGTTGGCTAGCACTGACGAAGAATTCCACAAAATGGTTAAGGACTTAATTGGAAAGCGCAGAAGATTTGAATCTGCTGTCACAAATGAGGGTACTACCCATCCACAATCTGTTATTACTGAAGATATTTCTACACCGCAGGCATAA 1905 0.4205 MFVSCQKYNPYFPCSSFPLHNPTTTCTIFNCQNPKEHHSIIRKHNSKSTAYLLQHLALKDGVPISTSIPKPSELLDPMPHDEKVKVLELSLVRKRTPQFPGSIYAQSPGDPDVGSSLPPIRTLFQSGVDPDDKDEKEEEEEMIMRALEIRRKVTEEVFKEALRKGKFGITYSTNLIGRLSGFLDHIMIEAANLKRLPGFSNSSFNLRAKTVIDDSKVVPLIRWLKHNALSYPRIAKVILMSRGKPEAIRSFVMWLKSVRVKGEFLGVVMLKAGDNILQRRHEELDEIVQYLESNGVRRDWMGYVISRCPQLLSYSLEEVKIRVHFFLDMGLNEKDFGTMVFDFPRVLGYYSLEEMNEKVNYLKEFGLQLGDVGKLLAFRPQLMACSIEEHWKPLVKYLYYYGITRDGMKRMLIIKPMVFCANLEKTIVPKVKFFEDIGVHNEGIGSMLVKFPPLLTYSLHKKIRPVVIFLMTKAGVKEKDIGKVVALGPELLGCNIVHKLDVNVKYFLSLGIRLRQLGEMITDFPLLLRYNPDVLRPKYIYLRKSMIRPLEDVIEFPRFFSYSLEGRIIPRHKVLVENHINIKLRYMLASTDEEFHKMVKDLIGKRRRFESAVTNEGTTHPQSVITEDISTPQA* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0411 634 MobiDBLite consensus disorder prediction 613 634 - -
Vra2g0411 634 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF2, CHLOROPLASTIC 64 619 - -
Vra2g0411 634 MobiDBLite consensus disorder prediction 614 634 - -
Vra2g0411 634 SMART mt_12 482 513 IPR003690 GO:0003690|GO:0006355
Vra2g0411 634 SMART mt_12 518 549 IPR003690 GO:0003690|GO:0006355
Vra2g0411 634 SMART mt_12 445 477 IPR003690 GO:0003690|GO:0006355
Vra2g0411 634 SMART mt_12 409 440 IPR003690 GO:0003690|GO:0006355
Vra2g0411 634 SMART mt_12 373 404 IPR003690 GO:0003690|GO:0006355
Vra2g0411 634 SMART mt_12 302 332 IPR003690 GO:0003690|GO:0006355
Vra2g0411 634 SMART mt_12 337 368 IPR003690 GO:0003690|GO:0006355
Vra2g0411 634 SMART mt_12 550 581 IPR003690 GO:0003690|GO:0006355
Vra2g0411 634 Coils Coil 136 156 - -
Vra2g0411 634 PANTHER CGI-12 PROTEIN-RELATED 64 619 IPR003690 GO:0003690|GO:0006355
Vra2g0411 634 Pfam mTERF 233 364 IPR003690 GO:0003690|GO:0006355
Vra2g0411 634 Pfam mTERF 354 595 IPR003690 GO:0003690|GO:0006355
Vra2g0411 634 Gene3D Transcription termination factor 3, mitochondrial 378 602 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0411 Vra-Chr2 3206011 3209560 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vra2g0411 mTERF 7.8e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0411 K15032 - zju:107426883 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0411 2 3206011 3209560 Vra2g0411 2 3206011 3209560 ECH