Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0395 ATGGCACCAAAGAAGGATAAGGCTCCTCCACCTTCCTCCAAGCCCGCCAAATCTGGCGGTGGCAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAATAACATGGTGCTGTTTGACCAGGGCACCTATGACAAACTCCTCTCAGAAGCGCCCAAATACAAGCTCATAACTCCTTCTATTCTCTCTGATCGTTTGAGGATTAATGGATCACTTGCAAGGAAGGCTATAAGAGAACTGATGGCTAGAGGTTCAATCAGGATGGTGTCTGCCCATGCCAGTCAGCAAATTTACACCAGGGCAACAAACACCTAA 327 0.4771 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGSIRMVSAHASQQIYTRATNT* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0395 108 PANTHER 40S RIBOSOMAL PROTEIN S25 2 108 IPR004977 -
Vra2g0395 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
Vra2g0395 108 PANTHER BNAA04G12260D PROTEIN 2 108 - -
Vra2g0395 108 MobiDBLite consensus disorder prediction 1 36 - -
Vra2g0395 108 Gene3D - 21 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0395 Vra-Chr2 3074159 3075719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0395 1 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 92.523 1.37e-55 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0395 K02975 - gmx:100499810 162.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0395 2 3074159 3075719 Vra2g0395 2 3074159 3075719 ECH