Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g0386 ATGAAGGACGCAGATGTTTCAAGGCAGATCCAGCAGATGATCAGGTTCATCCGCCAAGAAGCTGAGGAGAAAGCGAATGAAATATCTGTTGCTGCTGAAGAAGAATTCAATATTGAGAAGCTGGAAATACTTGAAGCTGAAAAGAAAAAAATCAAGCAAGAGTATGAACGAAAAGCCAAACAAATTGACGTTCGTAGAAAAATTGAATACTCAACACAATTGAATGCATCCCGAATAAAAGTGCTTCAAGCACAGGATGATGCAGTGAATTCCATGAAGGACGCTGCTAGAACAGGTCTTTCGGGTCTCTCAAATGACAAGAAAGTATACAAAAAACTCGTCAGAGACATGATTATTCAGGGTTTACTACGCTTGAGGGAACCATCTGTGCTGATAAGATGCAGAGAGAGTGATCGTAAGCTAGTTGAGTCCTTGATAGAGGAAGCCAAAAAAGAATATTCAGAGAAAGCAAACGTGCAAGCCCCTAAAATTACCCTTGATGATCGTGTTTATCTCCCACCACCACCTAAGAAAAATGCTGCAACGGATTCCCATGAACCCTTTTGCTCTGGAGGAATAGTGTTGGCCTCAGAGGATGGGAAGATTGTGCTGGAAAACACCCTCGATGCACGGTTGGATGTTATTTTTCGACAGAAACTGCCCGAGATAAGGAAGATGCTATTAGCTGGAGCTTGA 696 0.4224 MKDADVSRQIQQMIRFIRQEAEEKANEISVAAEEEFNIEKLEILEAEKKKIKQEYERKAKQIDVRRKIEYSTQLNASRIKVLQAQDDAVNSMKDAARTGLSGLSNDKKVYKKLVRDMIIQGLLRLREPSVLIRCRESDRKLVESLIEEAKKEYSEKANVQAPKITLDDRVYLPPPPKKNAATDSHEPFCSGGIVLASEDGKIVLENTLDARLDVIFRQKLPEIRKMLLAGA* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g0386 231 SUPERFAMILY V-type ATPase subunit E-like 87 227 - -
Vra2g0386 231 Gene3D - 92 230 IPR038495 -
Vra2g0386 231 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 229 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vra2g0386 231 Gene3D - 1 62 - -
Vra2g0386 231 Pfam ATP synthase (E/31 kDa) subunit 16 227 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vra2g0386 231 Coils Coil 14 61 - -
Vra2g0386 231 Hamap V-type proton ATPase subunit E [atpE]. 8 229 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vra2g0386 231 PANTHER V-TYPE PROTON ATPASE SUBUNIT E2 ISOFORM X1 1 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g0386 Vra-Chr2 2985882 2987514 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g0386 1 229 Primary Pumps ATPases(2) AT4G11150 67.686 1.07e-110 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra2g0386 K02150 - gmx:100791813 377.481